Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
HDGFP51858 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC28.18■■■□□ 2.1
HDGFP51858 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
HDGFP51858 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
HDGFP51858 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
HDGFP51858 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
HDGFP51858 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC28.17■■■□□ 2.1
HDGFP51858 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
HDGFP51858 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC28.17■■■□□ 2.1
HDGFP51858 AC007663.1-201ENST00000438948 1240 ntBASIC28.17■■■□□ 2.1
HDGFP51858 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC28.17■■■□□ 2.1
HDGFP51858 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
HDGFP51858 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
HDGFP51858 KRT126P-201ENST00000549467 1181 ntBASIC28.17■■■□□ 2.1
HDGFP51858 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC28.17■■■□□ 2.1
HDGFP51858 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC28.17■■■□□ 2.1
HDGFP51858 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
HDGFP51858 AL024507.2-201ENST00000606070 2574 ntBASIC28.17■■■□□ 2.1
HDGFP51858 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
HDGFP51858 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC28.17■■■□□ 2.1
HDGFP51858 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
HDGFP51858 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
HDGFP51858 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HDGFP51858 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HDGFP51858 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
HDGFP51858 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HDGFP51858 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
HDGFP51858 AC009947.2-201ENST00000444014 672 ntBASIC28.16■■■□□ 2.1
HDGFP51858 TSPY17P-201ENST00000450329 467 ntBASIC28.16■■■□□ 2.1
HDGFP51858 TOLLIP-AS1-201ENST00000530897 939 ntBASIC28.16■■■□□ 2.1
HDGFP51858 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
HDGFP51858 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC28.16■■■□□ 2.1
HDGFP51858 HLA-A-209ENST00000638375 975 ntBASIC28.16■■■□□ 2.1
HDGFP51858 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
HDGFP51858 AC005229.4-201ENST00000610085 2198 ntBASIC28.16■■■□□ 2.1
HDGFP51858 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC28.15■■■□□ 2.1
HDGFP51858 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
HDGFP51858 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
HDGFP51858 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC28.15■■■□□ 2.1
HDGFP51858 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
HDGFP51858 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC28.15■■■□□ 2.1
HDGFP51858 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
HDGFP51858 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HDGFP51858 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
HDGFP51858 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
HDGFP51858 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
HDGFP51858 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC28.15■■■□□ 2.1
HDGFP51858 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC28.15■■■□□ 2.1
HDGFP51858 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC28.15■■■□□ 2.1
HDGFP51858 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC28.15■■■□□ 2.1
HDGFP51858 AL121956.5-201ENST00000625261 221 ntBASIC28.15■■■□□ 2.1
HDGFP51858 AC141257.4-201ENST00000634557 245 ntBASIC28.15■■■□□ 2.1
HDGFP51858 AC136944.6-201ENST00000634818 245 ntBASIC28.15■■■□□ 2.1
HDGFP51858 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC28.15■■■□□ 2.1
HDGFP51858 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
HDGFP51858 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HDGFP51858 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC28.15■■■□□ 2.1
HDGFP51858 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC28.15■■■□□ 2.1
HDGFP51858 ERF-202ENST00000440177 2032 ntTSL 2 BASIC28.14■■■□□ 2.1
HDGFP51858 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC28.14■■■□□ 2.1
HDGFP51858 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC28.14■■■□□ 2.1
HDGFP51858 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
HDGFP51858 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
HDGFP51858 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC28.14■■■□□ 2.1
HDGFP51858 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
HDGFP51858 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC28.14■■■□□ 2.1
HDGFP51858 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC28.14■■■□□ 2.1
HDGFP51858 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC28.14■■■□□ 2.1
HDGFP51858 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
HDGFP51858 AC092338.2-201ENST00000568827 1415 ntBASIC28.14■■■□□ 2.1
HDGFP51858 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC28.14■■■□□ 2.1
HDGFP51858 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
HDGFP51858 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC28.14■■■□□ 2.09
HDGFP51858 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
HDGFP51858 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
HDGFP51858 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
HDGFP51858 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
HDGFP51858 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
HDGFP51858 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC28.13■■■□□ 2.09
HDGFP51858 COPS8-203ENST00000409334 794 ntTSL 5 BASIC28.13■■■□□ 2.09
HDGFP51858 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC28.13■■■□□ 2.09
HDGFP51858 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
HDGFP51858 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC28.13■■■□□ 2.09
HDGFP51858 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
HDGFP51858 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
HDGFP51858 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
HDGFP51858 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
HDGFP51858 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
HDGFP51858 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HDGFP51858 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
HDGFP51858 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC28.12■■■□□ 2.09
HDGFP51858 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HDGFP51858 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HDGFP51858 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC28.12■■■□□ 2.09
HDGFP51858 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HDGFP51858 HOMER2P1-201ENST00000455653 964 ntBASIC28.12■■■□□ 2.09
HDGFP51858 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
HDGFP51858 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HDGFP51858 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC28.12■■■□□ 2.09
HDGFP51858 DPP3P2-201ENST00000416030 1696 ntBASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms