Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
UBE2AP49459 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC12.54□□□□□ -0.4
UBE2AP49459 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UBE2AP49459 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 KRT18P5-201ENST00000436075 1291 ntBASIC12.54□□□□□ -0.4
UBE2AP49459 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC12.54□□□□□ -0.4
UBE2AP49459 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
UBE2AP49459 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UBE2AP49459 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 TFG-210ENST00000620299 1289 ntTSL 5 BASIC12.54□□□□□ -0.4
UBE2AP49459 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC12.54□□□□□ -0.4
UBE2AP49459 AC008694.1-202ENST00000636953 945 ntBASIC12.54□□□□□ -0.4
UBE2AP49459 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC12.54□□□□□ -0.4
UBE2AP49459 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
UBE2AP49459 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC12.54□□□□□ -0.4
UBE2AP49459 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.54□□□□□ -0.4
UBE2AP49459 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2AP49459 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC12.53□□□□□ -0.4
UBE2AP49459 EML3-217ENST00000531557 2509 ntTSL 5 BASIC12.53□□□□□ -0.4
UBE2AP49459 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 FER1L4-210ENST00000615531 5998 ntBASIC12.53□□□□□ -0.4
UBE2AP49459 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC12.53□□□□□ -0.4
UBE2AP49459 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC12.53□□□□□ -0.4
UBE2AP49459 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UBE2AP49459 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC12.53□□□□□ -0.4
UBE2AP49459 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
UBE2AP49459 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2AP49459 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC12.53□□□□□ -0.4
UBE2AP49459 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UBE2AP49459 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2AP49459 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC12.53□□□□□ -0.4
UBE2AP49459 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC12.53□□□□□ -0.4
UBE2AP49459 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC12.53□□□□□ -0.4
UBE2AP49459 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2AP49459 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
UBE2AP49459 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2AP49459 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
UBE2AP49459 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
UBE2AP49459 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
UBE2AP49459 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UBE2AP49459 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC12.53□□□□□ -0.4
UBE2AP49459 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2AP49459 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UBE2AP49459 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2AP49459 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBE2AP49459 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBE2AP49459 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC12.52□□□□□ -0.4
UBE2AP49459 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC12.52□□□□□ -0.4
UBE2AP49459 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.52□□□□□ -0.4
UBE2AP49459 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBE2AP49459 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC12.52□□□□□ -0.4
UBE2AP49459 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.52□□□□□ -0.4
UBE2AP49459 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBE2AP49459 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
UBE2AP49459 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC12.52□□□□□ -0.41
UBE2AP49459 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2AP49459 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2AP49459 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.52□□□□□ -0.41
UBE2AP49459 BET1L-204ENST00000410108 637 ntTSL 3 BASIC12.52□□□□□ -0.41
UBE2AP49459 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
UBE2AP49459 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC12.52□□□□□ -0.41
UBE2AP49459 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC12.52□□□□□ -0.41
UBE2AP49459 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms