Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
KRT6CP48668 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.17■□□□□ 0.66
KRT6CP48668 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT6CP48668 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT6CP48668 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
KRT6CP48668 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 AC133552.2-202ENST00000575694 574 ntBASIC19.17■□□□□ 0.66
KRT6CP48668 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KRT6CP48668 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.17■□□□□ 0.66
KRT6CP48668 AC080038.1-201ENST00000611274 1154 ntBASIC19.17■□□□□ 0.66
KRT6CP48668 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT6CP48668 AP001271.2-201ENST00000624018 1556 ntBASIC19.17■□□□□ 0.66
KRT6CP48668 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT6CP48668 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT6CP48668 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT6CP48668 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT6CP48668 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.16■□□□□ 0.66
KRT6CP48668 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6CP48668 KRT17P1-201ENST00000399211 1546 ntBASIC19.16■□□□□ 0.66
KRT6CP48668 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6CP48668 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6CP48668 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6CP48668 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6CP48668 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6CP48668 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6CP48668 LSM12P1-201ENST00000411836 588 ntBASIC19.16■□□□□ 0.66
KRT6CP48668 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT6CP48668 AC138932.1-201ENST00000534164 6830 ntBASIC19.16■□□□□ 0.66
KRT6CP48668 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6CP48668 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6CP48668 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT6CP48668 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6CP48668 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6CP48668 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6CP48668 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6CP48668 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
KRT6CP48668 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6CP48668 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
KRT6CP48668 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.15■□□□□ 0.66
KRT6CP48668 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.15■□□□□ 0.66
KRT6CP48668 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6CP48668 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6CP48668 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.15■□□□□ 0.66
KRT6CP48668 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
KRT6CP48668 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.15■□□□□ 0.66
KRT6CP48668 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6CP48668 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.15■□□□□ 0.66
KRT6CP48668 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.15■□□□□ 0.66
KRT6CP48668 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.15■□□□□ 0.66
KRT6CP48668 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6CP48668 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6CP48668 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
KRT6CP48668 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
KRT6CP48668 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6CP48668 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6CP48668 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6CP48668 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.14■□□□□ 0.66
KRT6CP48668 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
KRT6CP48668 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KRT6CP48668 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KRT6CP48668 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KRT6CP48668 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KRT6CP48668 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6CP48668 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
KRT6CP48668 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6CP48668 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.14■□□□□ 0.65
KRT6CP48668 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6CP48668 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.14■□□□□ 0.65
KRT6CP48668 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.14■□□□□ 0.65
KRT6CP48668 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.14■□□□□ 0.65
KRT6CP48668 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6CP48668 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.14■□□□□ 0.65
KRT6CP48668 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.14■□□□□ 0.65
KRT6CP48668 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6CP48668 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6CP48668 TREX1-205ENST00000625293 1783 ntBASIC19.14■□□□□ 0.65
KRT6CP48668 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.14■□□□□ 0.65
KRT6CP48668 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6CP48668 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.13■□□□□ 0.65
KRT6CP48668 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6CP48668 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.13■□□□□ 0.65
KRT6CP48668 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6CP48668 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6CP48668 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
KRT6CP48668 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6CP48668 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
KRT6CP48668 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.13■□□□□ 0.65
KRT6CP48668 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms