Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RXRGP48443 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RXRGP48443 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RXRGP48443 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.8■□□□□ 0.76
RXRGP48443 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RXRGP48443 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RXRGP48443 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RXRGP48443 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.8■□□□□ 0.76
RXRGP48443 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
RXRGP48443 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.8■□□□□ 0.76
RXRGP48443 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.8■□□□□ 0.76
RXRGP48443 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.8■□□□□ 0.76
RXRGP48443 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.8■□□□□ 0.76
RXRGP48443 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.8■□□□□ 0.76
RXRGP48443 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.8■□□□□ 0.76
RXRGP48443 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RXRGP48443 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RXRGP48443 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RXRGP48443 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RXRGP48443 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RXRGP48443 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RXRGP48443 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.79■□□□□ 0.76
RXRGP48443 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.79■□□□□ 0.76
RXRGP48443 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.79■□□□□ 0.76
RXRGP48443 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.79■□□□□ 0.76
RXRGP48443 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.79■□□□□ 0.76
RXRGP48443 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.79■□□□□ 0.76
RXRGP48443 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.79■□□□□ 0.76
RXRGP48443 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.79■□□□□ 0.76
RXRGP48443 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 AC027702.1-201ENST00000563810 1770 ntBASIC19.79■□□□□ 0.76
RXRGP48443 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.79■□□□□ 0.76
RXRGP48443 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRGP48443 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.79■□□□□ 0.76
RXRGP48443 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.79■□□□□ 0.76
RXRGP48443 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RXRGP48443 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.78■□□□□ 0.76
RXRGP48443 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.78■□□□□ 0.76
RXRGP48443 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RXRGP48443 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RXRGP48443 KRT8P36-201ENST00000489121 1440 ntBASIC19.78■□□□□ 0.76
RXRGP48443 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.78■□□□□ 0.76
RXRGP48443 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RXRGP48443 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RXRGP48443 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RXRGP48443 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RXRGP48443 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RXRGP48443 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RXRGP48443 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RXRGP48443 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RXRGP48443 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.78■□□□□ 0.76
RXRGP48443 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.78■□□□□ 0.76
RXRGP48443 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RXRGP48443 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RXRGP48443 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RXRGP48443 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RXRGP48443 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.78■□□□□ 0.76
RXRGP48443 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.78■□□□□ 0.76
RXRGP48443 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.78■□□□□ 0.76
RXRGP48443 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.78■□□□□ 0.76
RXRGP48443 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RXRGP48443 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RXRGP48443 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
RXRGP48443 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.77■□□□□ 0.76
RXRGP48443 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RXRGP48443 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.77■□□□□ 0.76
RXRGP48443 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RXRGP48443 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RXRGP48443 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
RXRGP48443 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RXRGP48443 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RXRGP48443 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RXRGP48443 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RXRGP48443 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.77■□□□□ 0.76
RXRGP48443 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RXRGP48443 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RXRGP48443 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.77■□□□□ 0.76
RXRGP48443 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RXRGP48443 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RXRGP48443 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.77■□□□□ 0.76
RXRGP48443 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.77■□□□□ 0.76
RXRGP48443 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RXRGP48443 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.77■□□□□ 0.76
RXRGP48443 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RXRGP48443 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RXRGP48443 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RXRGP48443 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RXRGP48443 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms