Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC6A12P48065 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A12P48065 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A12P48065 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A12P48065 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A12P48065 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A12P48065 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SLC6A12P48065 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC6A12P48065 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A12P48065 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A12P48065 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC6A12P48065 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A12P48065 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.14■□□□□ 0.65
SLC6A12P48065 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A12P48065 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A12P48065 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC6A12P48065 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A12P48065 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SLC6A12P48065 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A12P48065 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SLC6A12P48065 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SLC6A12P48065 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC6A12P48065 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A12P48065 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.13■□□□□ 0.65
SLC6A12P48065 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC6A12P48065 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC6A12P48065 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC6A12P48065 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC6A12P48065 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A12P48065 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SLC6A12P48065 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A12P48065 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A12P48065 TFP1-202ENST00000475455 1573 ntBASIC19.13■□□□□ 0.65
SLC6A12P48065 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC6A12P48065 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A12P48065 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC6A12P48065 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A12P48065 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC6A12P48065 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SLC6A12P48065 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A12P48065 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A12P48065 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A12P48065 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A12P48065 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A12P48065 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLC6A12P48065 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A12P48065 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A12P48065 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC6A12P48065 AC124283.5-201ENST00000624661 1809 ntBASIC19.12■□□□□ 0.65
SLC6A12P48065 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A12P48065 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLC6A12P48065 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A12P48065 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A12P48065 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A12P48065 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A12P48065 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.12■□□□□ 0.65
SLC6A12P48065 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC6A12P48065 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC6A12P48065 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.12■□□□□ 0.65
SLC6A12P48065 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.12■□□□□ 0.65
SLC6A12P48065 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.12■□□□□ 0.65
SLC6A12P48065 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC6A12P48065 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A12P48065 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SLC6A12P48065 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A12P48065 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC6A12P48065 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC6A12P48065 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A12P48065 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC6A12P48065 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A12P48065 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC6A12P48065 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A12P48065 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A12P48065 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC6A12P48065 ID1-201ENST00000376105 1233 ntBASIC19.11■□□□□ 0.65
SLC6A12P48065 AL355802.2-201ENST00000402069 882 ntBASIC19.11■□□□□ 0.65
SLC6A12P48065 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
SLC6A12P48065 RPS2P52-201ENST00000469610 820 ntBASIC19.11■□□□□ 0.65
SLC6A12P48065 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC6A12P48065 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A12P48065 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A12P48065 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
SLC6A12P48065 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A12P48065 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SLC6A12P48065 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC6A12P48065 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC6A12P48065 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A12P48065 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC6A12P48065 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A12P48065 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A12P48065 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A12P48065 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A12P48065 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A12P48065 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SLC6A12P48065 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A12P48065 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A12P48065 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SLC6A12P48065 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A12P48065 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC6A12P48065 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms