Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC003957.1-201ENST00000625108 2673 ntBASIC18.12■□□□□ 0.49
RFC3P40938 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.12■□□□□ 0.49
RFC3P40938 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC3P40938 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RFC3P40938 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC3P40938 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC3P40938 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.12■□□□□ 0.49
RFC3P40938 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.12■□□□□ 0.49
RFC3P40938 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.12■□□□□ 0.49
RFC3P40938 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.12■□□□□ 0.49
RFC3P40938 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC3P40938 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC3P40938 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC3P40938 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC3P40938 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC3P40938 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.12■□□□□ 0.49
RFC3P40938 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC3P40938 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC3P40938 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC3P40938 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.12■□□□□ 0.49
RFC3P40938 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RFC3P40938 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC3P40938 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RFC3P40938 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC3P40938 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC3P40938 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC3P40938 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC3P40938 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC3P40938 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.11■□□□□ 0.49
RFC3P40938 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.11■□□□□ 0.49
RFC3P40938 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC3P40938 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFC3P40938 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.11■□□□□ 0.49
RFC3P40938 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC3P40938 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC3P40938 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.11■□□□□ 0.49
RFC3P40938 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RFC3P40938 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFC3P40938 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC3P40938 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.11■□□□□ 0.49
RFC3P40938 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC3P40938 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC3P40938 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC3P40938 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.1■□□□□ 0.49
RFC3P40938 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC3P40938 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.1■□□□□ 0.49
RFC3P40938 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC3P40938 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.1■□□□□ 0.49
RFC3P40938 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC3P40938 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC3P40938 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.1■□□□□ 0.49
RFC3P40938 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC3P40938 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC3P40938 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.1■□□□□ 0.49
RFC3P40938 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC3P40938 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RFC3P40938 AC113410.3-201ENST00000623366 203 ntBASIC18.1■□□□□ 0.49
RFC3P40938 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.1■□□□□ 0.49
RFC3P40938 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC3P40938 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC3P40938 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC3P40938 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.1■□□□□ 0.49
RFC3P40938 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.1■□□□□ 0.49
RFC3P40938 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC3P40938 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC3P40938 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RFC3P40938 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC3P40938 HTR7P1-201ENST00000538670 1336 ntBASIC18.09■□□□□ 0.49
RFC3P40938 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC3P40938 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RFC3P40938 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.09■□□□□ 0.49
RFC3P40938 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.09■□□□□ 0.49
RFC3P40938 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC3P40938 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RFC3P40938 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC3P40938 AIRN-201ENST00000601203 4374 ntBASIC18.09■□□□□ 0.49
RFC3P40938 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC3P40938 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC3P40938 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
RFC3P40938 AL135905.2-201ENST00000584934 1404 ntBASIC18.08■□□□□ 0.49
RFC3P40938 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
RFC3P40938 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFC3P40938 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.08■□□□□ 0.48
RFC3P40938 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC3P40938 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC3P40938 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.08■□□□□ 0.48
RFC3P40938 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms