Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V1AP38606 LINC01238-205ENST00000567549 1107 ntBASIC25.34■■□□□ 1.65
ATP6V1AP38606 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC25.34■■□□□ 1.65
ATP6V1AP38606 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC25.34■■□□□ 1.65
ATP6V1AP38606 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V1AP38606 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V1AP38606 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V1AP38606 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V1AP38606 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V1AP38606 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATP6V1AP38606 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.33■■□□□ 1.65
ATP6V1AP38606 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATP6V1AP38606 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATP6V1AP38606 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATP6V1AP38606 HIST1H2APS4-201ENST00000362070 348 ntBASIC25.33■■□□□ 1.65
ATP6V1AP38606 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATP6V1AP38606 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATP6V1AP38606 HMGA1P5-201ENST00000412453 271 ntBASIC25.33■■□□□ 1.65
ATP6V1AP38606 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC25.33■■□□□ 1.65
ATP6V1AP38606 AC008040.2-201ENST00000461049 708 ntBASIC25.33■■□□□ 1.65
ATP6V1AP38606 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATP6V1AP38606 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
ATP6V1AP38606 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
ATP6V1AP38606 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
ATP6V1AP38606 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
ATP6V1AP38606 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
ATP6V1AP38606 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
ATP6V1AP38606 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
ATP6V1AP38606 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.32■■□□□ 1.64
ATP6V1AP38606 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V1AP38606 FP700111.2-201ENST00000619190 1892 ntBASIC25.32■■□□□ 1.64
ATP6V1AP38606 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V1AP38606 RCC2P6-201ENST00000526625 1557 ntBASIC25.32■■□□□ 1.64
ATP6V1AP38606 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V1AP38606 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V1AP38606 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V1AP38606 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V1AP38606 ISCU-203ENST00000431221 799 ntTSL 2 BASIC25.32■■□□□ 1.64
ATP6V1AP38606 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V1AP38606 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC25.32■■□□□ 1.64
ATP6V1AP38606 AC091390.4-202ENST00000476426 537 ntBASIC25.32■■□□□ 1.64
ATP6V1AP38606 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC25.32■■□□□ 1.64
ATP6V1AP38606 CYGB-204ENST00000589342 815 ntTSL 3 BASIC25.32■■□□□ 1.64
ATP6V1AP38606 AC139887.4-201ENST00000607877 719 ntBASIC25.32■■□□□ 1.64
ATP6V1AP38606 AC091076.1-201ENST00000610741 619 ntBASIC25.32■■□□□ 1.64
ATP6V1AP38606 AC011298.2-201ENST00000617989 482 ntBASIC25.32■■□□□ 1.64
ATP6V1AP38606 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
ATP6V1AP38606 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
ATP6V1AP38606 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V1AP38606 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V1AP38606 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V1AP38606 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V1AP38606 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ATP6V1AP38606 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ATP6V1AP38606 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATP6V1AP38606 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.31■■□□□ 1.64
ATP6V1AP38606 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC25.31■■□□□ 1.64
ATP6V1AP38606 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATP6V1AP38606 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC25.31■■□□□ 1.64
ATP6V1AP38606 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
ATP6V1AP38606 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.31■■□□□ 1.64
ATP6V1AP38606 NMU-205ENST00000511469 756 ntTSL 3 BASIC25.31■■□□□ 1.64
ATP6V1AP38606 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.31■■□□□ 1.64
ATP6V1AP38606 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ATP6V1AP38606 MED25-212ENST00000618715 1467 ntTSL 5 BASIC25.31■■□□□ 1.64
ATP6V1AP38606 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC25.31■■□□□ 1.64
ATP6V1AP38606 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATP6V1AP38606 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ATP6V1AP38606 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATP6V1AP38606 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC25.31■■□□□ 1.64
ATP6V1AP38606 KRT16P6-202ENST00000425692 1426 ntBASIC25.3■■□□□ 1.64
ATP6V1AP38606 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC25.3■■□□□ 1.64
ATP6V1AP38606 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ATP6V1AP38606 COPE-203ENST00000351079 907 ntTSL 2 BASIC25.3■■□□□ 1.64
ATP6V1AP38606 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ATP6V1AP38606 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC25.3■■□□□ 1.64
ATP6V1AP38606 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
ATP6V1AP38606 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC25.3■■□□□ 1.64
ATP6V1AP38606 AL138966.2-201ENST00000621997 464 ntBASIC25.3■■□□□ 1.64
ATP6V1AP38606 MYC-208ENST00000641036 567 ntBASIC25.3■■□□□ 1.64
ATP6V1AP38606 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ATP6V1AP38606 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ATP6V1AP38606 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
ATP6V1AP38606 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ATP6V1AP38606 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC25.3■■□□□ 1.64
ATP6V1AP38606 FEM1AP4-201ENST00000443167 1987 ntBASIC25.29■■□□□ 1.64
ATP6V1AP38606 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ATP6V1AP38606 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ATP6V1AP38606 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ATP6V1AP38606 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
ATP6V1AP38606 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC25.29■■□□□ 1.64
ATP6V1AP38606 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
ATP6V1AP38606 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
ATP6V1AP38606 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.29■■□□□ 1.64
ATP6V1AP38606 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ATP6V1AP38606 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC25.29■■□□□ 1.64
ATP6V1AP38606 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ATP6V1AP38606 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ATP6V1AP38606 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
ATP6V1AP38606 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms