Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
KRT9P35527 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KRT9P35527 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT9P35527 AC009237.14-201ENST00000609975 1594 ntBASIC21.62■■□□□ 1.05
KRT9P35527 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
KRT9P35527 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
KRT9P35527 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT9P35527 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT9P35527 MCRIP2P1-201ENST00000394346 511 ntBASIC21.62■■□□□ 1.05
KRT9P35527 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT9P35527 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.62■■□□□ 1.05
KRT9P35527 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.62■■□□□ 1.05
KRT9P35527 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT9P35527 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT9P35527 AC005181.1-201ENST00000604782 1256 ntBASIC21.62■■□□□ 1.05
KRT9P35527 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT9P35527 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT9P35527 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT9P35527 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT9P35527 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KRT9P35527 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT9P35527 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT9P35527 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT9P35527 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT9P35527 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KRT9P35527 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT9P35527 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.61■■□□□ 1.05
KRT9P35527 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KRT9P35527 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT9P35527 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT9P35527 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
KRT9P35527 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT9P35527 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KRT9P35527 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.61■■□□□ 1.05
KRT9P35527 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.61■■□□□ 1.05
KRT9P35527 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KRT9P35527 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.61■■□□□ 1.05
KRT9P35527 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.61■■□□□ 1.05
KRT9P35527 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.61■■□□□ 1.05
KRT9P35527 AC073111.5-205ENST00000641717 521 ntBASIC21.61■■□□□ 1.05
KRT9P35527 AC004408.2-201ENST00000623613 2777 ntBASIC21.61■■□□□ 1.05
KRT9P35527 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
KRT9P35527 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.61■■□□□ 1.05
KRT9P35527 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT9P35527 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT9P35527 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.6■■□□□ 1.05
KRT9P35527 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT9P35527 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT9P35527 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT9P35527 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.6■■□□□ 1.05
KRT9P35527 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.6■■□□□ 1.05
KRT9P35527 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.6■■□□□ 1.05
KRT9P35527 OR10C1-204ENST00000622521 1039 ntBASIC21.6■■□□□ 1.05
KRT9P35527 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.6■■□□□ 1.05
KRT9P35527 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT9P35527 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT9P35527 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT9P35527 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT9P35527 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT9P35527 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT9P35527 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT9P35527 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KRT9P35527 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT9P35527 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT9P35527 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT9P35527 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.59■■□□□ 1.05
KRT9P35527 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT9P35527 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KRT9P35527 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
KRT9P35527 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.59■■□□□ 1.05
KRT9P35527 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.59■■□□□ 1.05
KRT9P35527 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.59■■□□□ 1.05
KRT9P35527 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
KRT9P35527 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT9P35527 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.59■■□□□ 1.05
KRT9P35527 CDCA4P2-201ENST00000441182 718 ntBASIC21.59■■□□□ 1.05
KRT9P35527 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT9P35527 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.59■■□□□ 1.05
KRT9P35527 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.59■■□□□ 1.05
KRT9P35527 Z82202.1-201ENST00000623446 1880 ntBASIC21.59■■□□□ 1.05
KRT9P35527 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT9P35527 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT9P35527 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.59■■□□□ 1.05
KRT9P35527 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT9P35527 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.59■■□□□ 1.05
KRT9P35527 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT9P35527 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT9P35527 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT9P35527 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
KRT9P35527 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT9P35527 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.58■■□□□ 1.05
KRT9P35527 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT9P35527 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.58■■□□□ 1.05
KRT9P35527 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KRT9P35527 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT9P35527 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
KRT9P35527 KRT8P17-201ENST00000453110 1448 ntBASIC21.58■■□□□ 1.05
KRT9P35527 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
KRT9P35527 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT9P35527 AIRN-201ENST00000601203 4374 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms