Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.73■■□□□ 1.07
HOXC8P31273 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
HOXC8P31273 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC8P31273 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC8P31273 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC8P31273 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.72■■□□□ 1.07
HOXC8P31273 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC8P31273 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC8P31273 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
HOXC8P31273 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
HOXC8P31273 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
HOXC8P31273 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC8P31273 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HOXC8P31273 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.72■■□□□ 1.07
HOXC8P31273 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.72■■□□□ 1.07
HOXC8P31273 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.72■■□□□ 1.07
HOXC8P31273 AC130371.2-201ENST00000619443 611 ntBASIC21.72■■□□□ 1.07
HOXC8P31273 AC131212.4-201ENST00000623606 975 ntBASIC21.72■■□□□ 1.07
HOXC8P31273 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC8P31273 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC8P31273 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.72■■□□□ 1.07
HOXC8P31273 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HOXC8P31273 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
HOXC8P31273 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.71■■□□□ 1.07
HOXC8P31273 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC8P31273 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC8P31273 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC8P31273 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
HOXC8P31273 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
HOXC8P31273 KRT18P57-201ENST00000443599 1254 ntBASIC21.71■■□□□ 1.07
HOXC8P31273 EGLN1P1-201ENST00000531623 762 ntBASIC21.71■■□□□ 1.07
HOXC8P31273 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.71■■□□□ 1.07
HOXC8P31273 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.71■■□□□ 1.07
HOXC8P31273 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.71■■□□□ 1.07
HOXC8P31273 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.71■■□□□ 1.07
HOXC8P31273 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC8P31273 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC8P31273 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.71■■□□□ 1.07
HOXC8P31273 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC8P31273 SMG8-203ENST00000578922 2178 ntBASIC21.71■■□□□ 1.07
HOXC8P31273 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC8P31273 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HOXC8P31273 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.07
HOXC8P31273 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
HOXC8P31273 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC8P31273 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC8P31273 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
HOXC8P31273 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
HOXC8P31273 BX119927.1-201ENST00000636596 1552 ntBASIC21.7■■□□□ 1.06
HOXC8P31273 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC8P31273 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC8P31273 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.7■■□□□ 1.06
HOXC8P31273 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
HOXC8P31273 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC8P31273 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.7■■□□□ 1.06
HOXC8P31273 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC8P31273 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.7■■□□□ 1.06
HOXC8P31273 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.7■■□□□ 1.06
HOXC8P31273 AL049597.2-201ENST00000565575 961 ntBASIC21.7■■□□□ 1.06
HOXC8P31273 AP000692.2-201ENST00000608391 879 ntBASIC21.7■■□□□ 1.06
HOXC8P31273 AL590326.2-201ENST00000625139 305 ntBASIC21.7■■□□□ 1.06
HOXC8P31273 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
HOXC8P31273 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC8P31273 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC8P31273 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
HOXC8P31273 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.7■■□□□ 1.06
HOXC8P31273 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC8P31273 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
HOXC8P31273 AL137013.1-201ENST00000432946 1228 ntBASIC21.69■■□□□ 1.06
HOXC8P31273 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.69■■□□□ 1.06
HOXC8P31273 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 AC008040.2-201ENST00000461049 708 ntBASIC21.69■■□□□ 1.06
HOXC8P31273 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.69■■□□□ 1.06
HOXC8P31273 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.69■■□□□ 1.06
HOXC8P31273 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.69■■□□□ 1.06
HOXC8P31273 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.69■■□□□ 1.06
HOXC8P31273 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.69■■□□□ 1.06
HOXC8P31273 RCC2P6-201ENST00000526625 1557 ntBASIC21.69■■□□□ 1.06
HOXC8P31273 TMEM179-206ENST00000616017 1645 ntBASIC21.69■■□□□ 1.06
HOXC8P31273 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.69■■□□□ 1.06
HOXC8P31273 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC8P31273 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HOXC8P31273 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms