Protein–RNA interactions for Protein: P28749

RBL1, Retinoblastoma-like protein 1, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBL1P28749 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RBL1P28749 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.31■□□□□ 0.84
RBL1P28749 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.31■□□□□ 0.84
RBL1P28749 GUSBP6-202ENST00000438529 1198 ntBASIC20.31■□□□□ 0.84
RBL1P28749 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.31■□□□□ 0.84
RBL1P28749 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.31■□□□□ 0.84
RBL1P28749 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.31■□□□□ 0.84
RBL1P28749 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RBL1P28749 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.31■□□□□ 0.84
RBL1P28749 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.31■□□□□ 0.84
RBL1P28749 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.31■□□□□ 0.84
RBL1P28749 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RBL1P28749 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RBL1P28749 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RBL1P28749 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.31■□□□□ 0.84
RBL1P28749 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RBL1P28749 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
RBL1P28749 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RBL1P28749 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.3■□□□□ 0.84
RBL1P28749 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.3■□□□□ 0.84
RBL1P28749 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.3■□□□□ 0.84
RBL1P28749 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.3■□□□□ 0.84
RBL1P28749 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 DUSP5P2-201ENST00000426873 1033 ntBASIC20.3■□□□□ 0.84
RBL1P28749 NCF1B-203ENST00000435988 1254 ntBASIC20.3■□□□□ 0.84
RBL1P28749 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.3■□□□□ 0.84
RBL1P28749 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.3■□□□□ 0.84
RBL1P28749 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.3■□□□□ 0.84
RBL1P28749 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RBL1P28749 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.3■□□□□ 0.84
RBL1P28749 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.3■□□□□ 0.84
RBL1P28749 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBL1P28749 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.29■□□□□ 0.84
RBL1P28749 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RBL1P28749 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RBL1P28749 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RBL1P28749 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RBL1P28749 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.29■□□□□ 0.84
RBL1P28749 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RBL1P28749 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RBL1P28749 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.29■□□□□ 0.84
RBL1P28749 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.29■□□□□ 0.84
RBL1P28749 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.29■□□□□ 0.84
RBL1P28749 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.29■□□□□ 0.84
RBL1P28749 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RBL1P28749 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RBL1P28749 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.29■□□□□ 0.84
RBL1P28749 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RBL1P28749 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.29■□□□□ 0.84
RBL1P28749 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.29■□□□□ 0.84
RBL1P28749 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RBL1P28749 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RBL1P28749 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RBL1P28749 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.28■□□□□ 0.84
RBL1P28749 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
RBL1P28749 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RBL1P28749 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.28■□□□□ 0.84
RBL1P28749 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RBL1P28749 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.28■□□□□ 0.84
RBL1P28749 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RBL1P28749 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RBL1P28749 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RBL1P28749 TSPY6P-201ENST00000448518 926 ntBASIC20.28■□□□□ 0.84
RBL1P28749 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.28■□□□□ 0.84
RBL1P28749 AC092118.2-201ENST00000613495 667 ntBASIC20.28■□□□□ 0.84
RBL1P28749 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RBL1P28749 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RBL1P28749 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RBL1P28749 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RBL1P28749 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.28■□□□□ 0.84
RBL1P28749 AC093484.2-201ENST00000580996 2166 ntBASIC20.28■□□□□ 0.84
RBL1P28749 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.28■□□□□ 0.84
RBL1P28749 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBL1P28749 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RBL1P28749 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBL1P28749 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.27■□□□□ 0.84
RBL1P28749 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBL1P28749 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBL1P28749 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.27■□□□□ 0.84
RBL1P28749 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.27■□□□□ 0.84
RBL1P28749 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.27■□□□□ 0.84
RBL1P28749 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RBL1P28749 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.27■□□□□ 0.84
RBL1P28749 AC091874.3-201ENST00000512672 1195 ntBASIC20.27■□□□□ 0.84
RBL1P28749 AC092666.2-201ENST00000613287 246 ntBASIC20.27■□□□□ 0.84
RBL1P28749 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBL1P28749 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms