Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCND1P24385 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.87■□□□□ 0.77
CCND1P24385 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.87■□□□□ 0.77
CCND1P24385 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.87■□□□□ 0.77
CCND1P24385 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.87■□□□□ 0.77
CCND1P24385 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCND1P24385 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCND1P24385 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCND1P24385 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCND1P24385 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCND1P24385 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCND1P24385 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCND1P24385 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.87■□□□□ 0.77
CCND1P24385 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCND1P24385 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.87■□□□□ 0.77
CCND1P24385 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.87■□□□□ 0.77
CCND1P24385 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.87■□□□□ 0.77
CCND1P24385 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.87■□□□□ 0.77
CCND1P24385 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.87■□□□□ 0.77
CCND1P24385 IKBKGP1-201ENST00000612193 1073 ntBASIC19.87■□□□□ 0.77
CCND1P24385 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCND1P24385 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.87■□□□□ 0.77
CCND1P24385 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCND1P24385 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCND1P24385 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCND1P24385 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCND1P24385 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.87■□□□□ 0.77
CCND1P24385 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCND1P24385 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.86■□□□□ 0.77
CCND1P24385 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CCND1P24385 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.86■□□□□ 0.77
CCND1P24385 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCND1P24385 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCND1P24385 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCND1P24385 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CCND1P24385 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.86■□□□□ 0.77
CCND1P24385 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCND1P24385 AC080038.1-201ENST00000611274 1154 ntBASIC19.86■□□□□ 0.77
CCND1P24385 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.86■□□□□ 0.77
CCND1P24385 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCND1P24385 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCND1P24385 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 AC068338.2-201ENST00000563278 1430 ntBASIC19.85■□□□□ 0.77
CCND1P24385 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.85■□□□□ 0.77
CCND1P24385 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.85■□□□□ 0.77
CCND1P24385 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.85■□□□□ 0.77
CCND1P24385 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.85■□□□□ 0.77
CCND1P24385 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CCND1P24385 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCND1P24385 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.85■□□□□ 0.77
CCND1P24385 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.85■□□□□ 0.77
CCND1P24385 AC004911.1-201ENST00000416316 871 ntBASIC19.85■□□□□ 0.77
CCND1P24385 PGM5P4-201ENST00000421970 445 ntBASIC19.85■□□□□ 0.77
CCND1P24385 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.85■□□□□ 0.77
CCND1P24385 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.85■□□□□ 0.77
CCND1P24385 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CCND1P24385 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.85■□□□□ 0.77
CCND1P24385 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.85■□□□□ 0.77
CCND1P24385 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCND1P24385 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCND1P24385 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.84■□□□□ 0.77
CCND1P24385 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCND1P24385 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCND1P24385 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCND1P24385 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCND1P24385 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCND1P24385 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCND1P24385 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCND1P24385 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.84■□□□□ 0.77
CCND1P24385 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCND1P24385 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCND1P24385 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCND1P24385 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.84■□□□□ 0.77
CCND1P24385 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.84■□□□□ 0.77
CCND1P24385 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.84■□□□□ 0.77
CCND1P24385 AC069236.1-201ENST00000604339 616 ntBASIC19.84■□□□□ 0.77
CCND1P24385 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCND1P24385 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
CCND1P24385 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.84■□□□□ 0.77
CCND1P24385 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCND1P24385 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCND1P24385 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.84■□□□□ 0.77
CCND1P24385 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms