Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL1P22362 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CCL1P22362 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL1P22362 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.05■□□□□ 0.32
CCL1P22362 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.05■□□□□ 0.32
CCL1P22362 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL1P22362 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CCL1P22362 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.05■□□□□ 0.32
CCL1P22362 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCL1P22362 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL1P22362 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.05■□□□□ 0.32
CCL1P22362 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CCL1P22362 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCL1P22362 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.05■□□□□ 0.32
CCL1P22362 AC092437.1-201ENST00000624794 1048 ntBASIC17.05■□□□□ 0.32
CCL1P22362 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.05■□□□□ 0.32
CCL1P22362 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.05■□□□□ 0.32
CCL1P22362 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.05■□□□□ 0.32
CCL1P22362 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL1P22362 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.05■□□□□ 0.32
CCL1P22362 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.05■□□□□ 0.32
CCL1P22362 AC116351.2-201ENST00000606540 1585 ntBASIC17.05■□□□□ 0.32
CCL1P22362 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL1P22362 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCL1P22362 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.05■□□□□ 0.32
CCL1P22362 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.05■□□□□ 0.32
CCL1P22362 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL1P22362 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL1P22362 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCL1P22362 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.04■□□□□ 0.32
CCL1P22362 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CCL1P22362 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.04■□□□□ 0.32
CCL1P22362 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.04■□□□□ 0.32
CCL1P22362 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.04■□□□□ 0.32
CCL1P22362 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.04■□□□□ 0.32
CCL1P22362 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.04■□□□□ 0.32
CCL1P22362 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CCL1P22362 AC080038.1-201ENST00000611274 1154 ntBASIC17.04■□□□□ 0.32
CCL1P22362 AC073111.5-205ENST00000641717 521 ntBASIC17.04■□□□□ 0.32
CCL1P22362 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCL1P22362 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.04■□□□□ 0.32
CCL1P22362 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 AC098818.2-201ENST00000564925 2320 ntBASIC17.04■□□□□ 0.32
CCL1P22362 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 AC018553.1-201ENST00000616682 1458 ntBASIC17.04■□□□□ 0.32
CCL1P22362 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL1P22362 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCL1P22362 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL1P22362 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCL1P22362 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCL1P22362 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL1P22362 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCL1P22362 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.03■□□□□ 0.32
CCL1P22362 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCL1P22362 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL1P22362 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL1P22362 AC073210.2-201ENST00000430369 194 ntBASIC17.03■□□□□ 0.32
CCL1P22362 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.03■□□□□ 0.32
CCL1P22362 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCL1P22362 AL050303.2-201ENST00000619798 666 ntBASIC17.03■□□□□ 0.32
CCL1P22362 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
CCL1P22362 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCL1P22362 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL1P22362 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL1P22362 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL1P22362 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL1P22362 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.03■□□□□ 0.32
CCL1P22362 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.03■□□□□ 0.32
CCL1P22362 AL032819.2-201ENST00000624543 2162 ntBASIC17.02■□□□□ 0.32
CCL1P22362 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCL1P22362 AC087289.5-201ENST00000586076 3175 ntBASIC17.02■□□□□ 0.32
CCL1P22362 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCL1P22362 MKRN4P-201ENST00000444706 1521 ntBASIC17.02■□□□□ 0.32
CCL1P22362 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCL1P22362 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCL1P22362 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCL1P22362 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCL1P22362 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCL1P22362 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCL1P22362 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.02■□□□□ 0.32
CCL1P22362 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCL1P22362 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms