Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 RARRES2P4-201ENST00000514074 484 ntBASIC18.37■□□□□ 0.53
TNFRSF1BP20333 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 AC011767.1-201ENST00000617410 1153 ntBASIC18.37■□□□□ 0.53
TNFRSF1BP20333 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 MCRIP2P1-201ENST00000394346 511 ntBASIC18.36■□□□□ 0.53
TNFRSF1BP20333 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 CNN2P6-201ENST00000439038 900 ntBASIC18.36■□□□□ 0.53
TNFRSF1BP20333 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 AL162412.1-201ENST00000567129 965 ntBASIC18.36■□□□□ 0.53
TNFRSF1BP20333 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 AL031963.3-201ENST00000606441 850 ntBASIC18.36■□□□□ 0.53
TNFRSF1BP20333 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 Z82202.1-201ENST00000623446 1880 ntBASIC18.36■□□□□ 0.53
TNFRSF1BP20333 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF1BP20333 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 AC068338.2-201ENST00000563278 1430 ntBASIC18.35■□□□□ 0.53
TNFRSF1BP20333 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 AL355472.2-201ENST00000422958 438 ntBASIC18.35■□□□□ 0.53
TNFRSF1BP20333 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 AC105020.6-201ENST00000621523 1217 ntBASIC18.35■□□□□ 0.53
TNFRSF1BP20333 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF1BP20333 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 KRT16P6-202ENST00000425692 1426 ntBASIC18.34■□□□□ 0.53
TNFRSF1BP20333 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms