Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATF1P18846 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.36■□□□□ 0.37
ATF1P18846 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.36■□□□□ 0.37
ATF1P18846 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.36■□□□□ 0.37
ATF1P18846 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.36■□□□□ 0.37
ATF1P18846 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ATF1P18846 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.36■□□□□ 0.37
ATF1P18846 TERF1P5-201ENST00000477545 1207 ntBASIC17.36■□□□□ 0.37
ATF1P18846 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ATF1P18846 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.36■□□□□ 0.37
ATF1P18846 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.36■□□□□ 0.37
ATF1P18846 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATF1P18846 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.35■□□□□ 0.37
ATF1P18846 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 AC026471.1-201ENST00000564629 3026 ntBASIC17.35■□□□□ 0.37
ATF1P18846 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.35■□□□□ 0.37
ATF1P18846 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ATF1P18846 NTF6G-201ENST00000591094 616 ntBASIC17.35■□□□□ 0.37
ATF1P18846 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.35■□□□□ 0.37
ATF1P18846 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
ATF1P18846 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
ATF1P18846 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
ATF1P18846 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.35■□□□□ 0.37
ATF1P18846 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATF1P18846 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.35■□□□□ 0.37
ATF1P18846 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.34■□□□□ 0.37
ATF1P18846 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.34■□□□□ 0.37
ATF1P18846 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATF1P18846 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATF1P18846 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATF1P18846 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATF1P18846 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATF1P18846 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATF1P18846 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.34■□□□□ 0.37
ATF1P18846 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.34■□□□□ 0.37
ATF1P18846 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATF1P18846 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.34■□□□□ 0.37
ATF1P18846 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.34■□□□□ 0.37
ATF1P18846 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATF1P18846 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATF1P18846 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ATF1P18846 AL591742.1-201ENST00000604433 565 ntBASIC17.34■□□□□ 0.37
ATF1P18846 AL356652.1-201ENST00000615962 565 ntBASIC17.34■□□□□ 0.37
ATF1P18846 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATF1P18846 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATF1P18846 AC010536.3-201ENST00000620306 533 ntBASIC17.34■□□□□ 0.37
ATF1P18846 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
ATF1P18846 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATF1P18846 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATF1P18846 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATF1P18846 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.33■□□□□ 0.37
ATF1P18846 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.33■□□□□ 0.37
ATF1P18846 AL032819.2-201ENST00000624543 2162 ntBASIC17.33■□□□□ 0.37
ATF1P18846 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATF1P18846 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATF1P18846 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATF1P18846 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.33■□□□□ 0.37
ATF1P18846 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.33■□□□□ 0.37
ATF1P18846 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.33■□□□□ 0.37
ATF1P18846 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.33■□□□□ 0.37
ATF1P18846 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.33■□□□□ 0.37
ATF1P18846 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.33■□□□□ 0.37
ATF1P18846 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.33■□□□□ 0.37
ATF1P18846 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATF1P18846 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATF1P18846 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
ATF1P18846 AC087633.2-202ENST00000565166 1439 ntBASIC17.33■□□□□ 0.36
ATF1P18846 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms