Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CDH1P12830 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CDH1P12830 HLA-G-202ENST00000376815 851 ntBASIC19.28■□□□□ 0.68
CDH1P12830 HLA-G-203ENST00000376818 1127 ntBASIC19.28■□□□□ 0.68
CDH1P12830 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.28■□□□□ 0.68
CDH1P12830 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.28■□□□□ 0.68
CDH1P12830 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CDH1P12830 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH1P12830 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH1P12830 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH1P12830 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDH1P12830 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH1P12830 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CDH1P12830 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH1P12830 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH1P12830 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH1P12830 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH1P12830 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH1P12830 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CDH1P12830 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH1P12830 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH1P12830 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH1P12830 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH1P12830 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH1P12830 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH1P12830 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH1P12830 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH1P12830 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH1P12830 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH1P12830 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH1P12830 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH1P12830 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH1P12830 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDH1P12830 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH1P12830 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH1P12830 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH1P12830 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.27■□□□□ 0.67
CDH1P12830 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CDH1P12830 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH1P12830 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH1P12830 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH1P12830 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH1P12830 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH1P12830 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH1P12830 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH1P12830 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH1P12830 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH1P12830 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH1P12830 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH1P12830 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH1P12830 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH1P12830 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH1P12830 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH1P12830 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH1P12830 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.26■□□□□ 0.67
CDH1P12830 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH1P12830 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH1P12830 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDH1P12830 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH1P12830 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH1P12830 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDH1P12830 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH1P12830 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDH1P12830 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH1P12830 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH1P12830 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH1P12830 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDH1P12830 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH1P12830 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH1P12830 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.25■□□□□ 0.67
CDH1P12830 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.25■□□□□ 0.67
CDH1P12830 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.25■□□□□ 0.67
CDH1P12830 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH1P12830 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.25■□□□□ 0.67
CDH1P12830 HLA-B-256ENST00000639848 1089 ntBASIC19.25■□□□□ 0.67
CDH1P12830 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH1P12830 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH1P12830 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH1P12830 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH1P12830 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDH1P12830 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH1P12830 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
CDH1P12830 BX323043.1-201ENST00000641006 1765 ntBASIC19.24■□□□□ 0.67
CDH1P12830 AC092368.3-202ENST00000574180 1591 ntBASIC19.24■□□□□ 0.67
CDH1P12830 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH1P12830 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.24■□□□□ 0.67
CDH1P12830 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH1P12830 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH1P12830 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH1P12830 AC018445.3-201ENST00000624177 1945 ntBASIC19.24■□□□□ 0.67
CDH1P12830 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDH1P12830 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH1P12830 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.24■□□□□ 0.67
CDH1P12830 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.24■□□□□ 0.67
CDH1P12830 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.24■□□□□ 0.67
CDH1P12830 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.24■□□□□ 0.67
CDH1P12830 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH1P12830 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.24■□□□□ 0.67
CDH1P12830 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH1P12830 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms