Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 KRT8P20-201ENST00000423953 1409 ntBASIC15.68■□□□□ 0.1
PF4V1P10720 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PF4V1P10720 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PF4V1P10720 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.67■□□□□ 0.1
PF4V1P10720 FEM1AP1-201ENST00000431297 1995 ntBASIC15.67■□□□□ 0.1
PF4V1P10720 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.67■□□□□ 0.1
PF4V1P10720 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.67■□□□□ 0.1
PF4V1P10720 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PF4V1P10720 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.67■□□□□ 0.1
PF4V1P10720 AC239809.2-201ENST00000415381 517 ntBASIC15.67■□□□□ 0.1
PF4V1P10720 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.67■□□□□ 0.1
PF4V1P10720 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.67■□□□□ 0.1
PF4V1P10720 AC023632.3-201ENST00000521633 145 ntBASIC15.67■□□□□ 0.1
PF4V1P10720 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.67■□□□□ 0.1
PF4V1P10720 AC005829.2-201ENST00000571422 1056 ntBASIC15.67■□□□□ 0.1
PF4V1P10720 AL031963.3-201ENST00000606441 850 ntBASIC15.67■□□□□ 0.1
PF4V1P10720 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PF4V1P10720 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.67■□□□□ 0.1
PF4V1P10720 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PF4V1P10720 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.67■□□□□ 0.1
PF4V1P10720 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.67■□□□□ 0.1
PF4V1P10720 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PF4V1P10720 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
PF4V1P10720 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PF4V1P10720 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PF4V1P10720 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PF4V1P10720 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
PF4V1P10720 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PF4V1P10720 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PF4V1P10720 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.66■□□□□ 0.1
PF4V1P10720 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.66■□□□□ 0.1
PF4V1P10720 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PF4V1P10720 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PF4V1P10720 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
PF4V1P10720 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.66■□□□□ 0.1
PF4V1P10720 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PF4V1P10720 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.66■□□□□ 0.1
PF4V1P10720 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
PF4V1P10720 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PF4V1P10720 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.65■□□□□ 0.1
PF4V1P10720 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.65■□□□□ 0.1
PF4V1P10720 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
PF4V1P10720 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PF4V1P10720 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.65■□□□□ 0.1
PF4V1P10720 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PF4V1P10720 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PF4V1P10720 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PF4V1P10720 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.65■□□□□ 0.1
PF4V1P10720 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms