Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT6AP02538 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6AP02538 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT6AP02538 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.16■□□□□ 0.66
KRT6AP02538 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6AP02538 KRT17P1-201ENST00000399211 1546 ntBASIC19.16■□□□□ 0.66
KRT6AP02538 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6AP02538 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6AP02538 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6AP02538 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6AP02538 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6AP02538 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT6AP02538 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6AP02538 LSM12P1-201ENST00000411836 588 ntBASIC19.16■□□□□ 0.66
KRT6AP02538 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT6AP02538 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6AP02538 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6AP02538 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT6AP02538 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6AP02538 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6AP02538 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT6AP02538 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6AP02538 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
KRT6AP02538 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
KRT6AP02538 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.15■□□□□ 0.66
KRT6AP02538 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.15■□□□□ 0.66
KRT6AP02538 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6AP02538 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
KRT6AP02538 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.15■□□□□ 0.66
KRT6AP02538 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.15■□□□□ 0.66
KRT6AP02538 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.15■□□□□ 0.66
KRT6AP02538 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6AP02538 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
KRT6AP02538 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
KRT6AP02538 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6AP02538 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6AP02538 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6AP02538 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRT6AP02538 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.14■□□□□ 0.66
KRT6AP02538 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KRT6AP02538 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
KRT6AP02538 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KRT6AP02538 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KRT6AP02538 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KRT6AP02538 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6AP02538 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
KRT6AP02538 AC138932.1-201ENST00000534164 6830 ntBASIC19.14■□□□□ 0.65
KRT6AP02538 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6AP02538 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.14■□□□□ 0.65
KRT6AP02538 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6AP02538 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.14■□□□□ 0.65
KRT6AP02538 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.14■□□□□ 0.65
KRT6AP02538 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.14■□□□□ 0.65
KRT6AP02538 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6AP02538 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.14■□□□□ 0.65
KRT6AP02538 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.14■□□□□ 0.65
KRT6AP02538 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6AP02538 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6AP02538 TREX1-205ENST00000625293 1783 ntBASIC19.14■□□□□ 0.65
KRT6AP02538 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.14■□□□□ 0.65
KRT6AP02538 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KRT6AP02538 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.13■□□□□ 0.65
KRT6AP02538 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.13■□□□□ 0.65
KRT6AP02538 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6AP02538 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6AP02538 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.13■□□□□ 0.65
KRT6AP02538 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6AP02538 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6AP02538 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6AP02538 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
KRT6AP02538 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6AP02538 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
KRT6AP02538 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.13■□□□□ 0.65
KRT6AP02538 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.13■□□□□ 0.65
KRT6AP02538 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.13■□□□□ 0.65
KRT6AP02538 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6AP02538 AC073111.5-205ENST00000641717 521 ntBASIC19.13■□□□□ 0.65
KRT6AP02538 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6AP02538 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6AP02538 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6AP02538 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6AP02538 AC116562.4-201ENST00000641316 2276 ntBASIC19.13■□□□□ 0.65
KRT6AP02538 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6AP02538 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
KRT6AP02538 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
KRT6AP02538 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6AP02538 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6AP02538 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6AP02538 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6AP02538 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6AP02538 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6AP02538 PHGDH-210ENST00000641115 1638 ntBASIC19.12■□□□□ 0.65
KRT6AP02538 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6AP02538 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6AP02538 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.12■□□□□ 0.65
KRT6AP02538 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.12■□□□□ 0.65
KRT6AP02538 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6AP02538 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms