Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 TMEM179-206ENST00000616017 1645 ntBASIC23.26■■□□□ 1.31
COL2A1P02458 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL2A1P02458 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
COL2A1P02458 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.25■■□□□ 1.31
COL2A1P02458 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL2A1P02458 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
COL2A1P02458 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.25■■□□□ 1.31
COL2A1P02458 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL2A1P02458 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.25■■□□□ 1.31
COL2A1P02458 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL2A1P02458 TERF1P1-201ENST00000311003 1181 ntBASIC23.25■■□□□ 1.31
COL2A1P02458 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL2A1P02458 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.25■■□□□ 1.31
COL2A1P02458 SLC25A3P1-201ENST00000443844 931 ntBASIC23.25■■□□□ 1.31
COL2A1P02458 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.25■■□□□ 1.31
COL2A1P02458 AC005363.2-201ENST00000618631 242 ntBASIC23.25■■□□□ 1.31
COL2A1P02458 AC131212.4-201ENST00000623606 975 ntBASIC23.25■■□□□ 1.31
COL2A1P02458 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL2A1P02458 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL2A1P02458 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL2A1P02458 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
COL2A1P02458 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL2A1P02458 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.25■■□□□ 1.31
COL2A1P02458 KRT18P22-201ENST00000402024 1347 ntBASIC23.25■■□□□ 1.31
COL2A1P02458 RCC2P6-201ENST00000526625 1557 ntBASIC23.25■■□□□ 1.31
COL2A1P02458 AP001271.2-201ENST00000624018 1556 ntBASIC23.25■■□□□ 1.31
COL2A1P02458 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL2A1P02458 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL2A1P02458 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL2A1P02458 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL2A1P02458 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.24■■□□□ 1.31
COL2A1P02458 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.24■■□□□ 1.31
COL2A1P02458 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.24■■□□□ 1.31
COL2A1P02458 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.24■■□□□ 1.31
COL2A1P02458 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
COL2A1P02458 AC073508.3-201ENST00000619697 1419 ntBASIC23.24■■□□□ 1.31
COL2A1P02458 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL2A1P02458 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL2A1P02458 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.24■■□□□ 1.31
COL2A1P02458 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL2A1P02458 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL2A1P02458 SMG8-203ENST00000578922 2178 ntBASIC23.24■■□□□ 1.31
COL2A1P02458 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL2A1P02458 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
COL2A1P02458 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC23.24■■□□□ 1.31
COL2A1P02458 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.24■■□□□ 1.31
COL2A1P02458 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.24■■□□□ 1.31
COL2A1P02458 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.24■■□□□ 1.31
COL2A1P02458 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.24■■□□□ 1.31
COL2A1P02458 C2orf69P3-201ENST00000565542 1120 ntBASIC23.24■■□□□ 1.31
COL2A1P02458 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.24■■□□□ 1.31
COL2A1P02458 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
COL2A1P02458 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL2A1P02458 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL2A1P02458 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL2A1P02458 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL2A1P02458 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
COL2A1P02458 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL2A1P02458 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL2A1P02458 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
COL2A1P02458 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.23■■□□□ 1.31
COL2A1P02458 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
COL2A1P02458 AC005521.1-201ENST00000393351 872 ntBASIC23.23■■□□□ 1.31
COL2A1P02458 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC23.23■■□□□ 1.31
COL2A1P02458 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.23■■□□□ 1.31
COL2A1P02458 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.23■■□□□ 1.31
COL2A1P02458 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL2A1P02458 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL2A1P02458 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.22■■□□□ 1.31
COL2A1P02458 AC096733.2-201ENST00000609937 1394 ntBASIC23.22■■□□□ 1.31
COL2A1P02458 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.22■■□□□ 1.31
COL2A1P02458 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC23.22■■□□□ 1.31
COL2A1P02458 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL2A1P02458 TSPY14P-201ENST00000303979 915 ntBASIC23.22■■□□□ 1.31
COL2A1P02458 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
COL2A1P02458 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.22■■□□□ 1.31
COL2A1P02458 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
COL2A1P02458 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.22■■□□□ 1.31
COL2A1P02458 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL2A1P02458 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL2A1P02458 RBM42-202ENST00000586618 771 ntTSL 3 BASIC23.22■■□□□ 1.31
COL2A1P02458 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL2A1P02458 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.22■■□□□ 1.31
COL2A1P02458 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL2A1P02458 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.22■■□□□ 1.31
COL2A1P02458 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.21■■□□□ 1.31
COL2A1P02458 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL2A1P02458 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL2A1P02458 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.21■■□□□ 1.31
COL2A1P02458 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
COL2A1P02458 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL2A1P02458 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL2A1P02458 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.21■■□□□ 1.31
COL2A1P02458 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
COL2A1P02458 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.21■■□□□ 1.31
COL2A1P02458 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.21■■□□□ 1.31
COL2A1P02458 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC23.21■■□□□ 1.31
COL2A1P02458 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.21■■□□□ 1.31
COL2A1P02458 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.21■■□□□ 1.31
COL2A1P02458 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms