Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.02■□□□□ 0.8
PDGFBP01127 AL031432.5-201ENST00000641059 760 ntBASIC20.02■□□□□ 0.8
PDGFBP01127 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFBP01127 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFBP01127 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDGFBP01127 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PDGFBP01127 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDGFBP01127 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDGFBP01127 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDGFBP01127 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.01■□□□□ 0.79
PDGFBP01127 AC004951.3-201ENST00000418645 1148 ntBASIC20.01■□□□□ 0.79
PDGFBP01127 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.01■□□□□ 0.79
PDGFBP01127 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PDGFBP01127 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDGFBP01127 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.01■□□□□ 0.79
PDGFBP01127 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.01■□□□□ 0.79
PDGFBP01127 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDGFBP01127 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.01■□□□□ 0.79
PDGFBP01127 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PDGFBP01127 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDGFBP01127 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.01■□□□□ 0.79
PDGFBP01127 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
PDGFBP01127 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDGFBP01127 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDGFBP01127 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFBP01127 C9orf163-202ENST00000624034 2573 ntBASIC20■□□□□ 0.79
PDGFBP01127 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFBP01127 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20■□□□□ 0.79
PDGFBP01127 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFBP01127 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFBP01127 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFBP01127 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20■□□□□ 0.79
PDGFBP01127 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFBP01127 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDGFBP01127 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PDGFBP01127 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20■□□□□ 0.79
PDGFBP01127 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PDGFBP01127 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20■□□□□ 0.79
PDGFBP01127 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20■□□□□ 0.79
PDGFBP01127 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20■□□□□ 0.79
PDGFBP01127 KRT18P16-201ENST00000510337 1294 ntBASIC20■□□□□ 0.79
PDGFBP01127 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20■□□□□ 0.79
PDGFBP01127 AL136038.3-201ENST00000561909 1096 ntBASIC20■□□□□ 0.79
PDGFBP01127 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
PDGFBP01127 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFBP01127 AL023803.3-201ENST00000615559 522 ntBASIC20■□□□□ 0.79
PDGFBP01127 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFBP01127 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFBP01127 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20■□□□□ 0.79
PDGFBP01127 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFBP01127 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFBP01127 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFBP01127 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PDGFBP01127 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFBP01127 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.99■□□□□ 0.79
PDGFBP01127 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFBP01127 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFBP01127 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.99■□□□□ 0.79
PDGFBP01127 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.99■□□□□ 0.79
PDGFBP01127 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.99■□□□□ 0.79
PDGFBP01127 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFBP01127 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFBP01127 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.99■□□□□ 0.79
PDGFBP01127 AL845331.1-201ENST00000424978 1190 ntBASIC19.99■□□□□ 0.79
PDGFBP01127 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFBP01127 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.99■□□□□ 0.79
PDGFBP01127 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.99■□□□□ 0.79
PDGFBP01127 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PDGFBP01127 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.99■□□□□ 0.79
PDGFBP01127 AC006538.3-201ENST00000612495 578 ntBASIC19.99■□□□□ 0.79
PDGFBP01127 AC008622.2-201ENST00000617006 1229 ntBASIC19.99■□□□□ 0.79
PDGFBP01127 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFBP01127 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFBP01127 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFBP01127 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFBP01127 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFBP01127 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.98■□□□□ 0.79
PDGFBP01127 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFBP01127 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.98■□□□□ 0.79
PDGFBP01127 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.98■□□□□ 0.79
PDGFBP01127 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.98■□□□□ 0.79
PDGFBP01127 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFBP01127 AC083849.1-201ENST00000615227 514 ntBASIC19.98■□□□□ 0.79
PDGFBP01127 AC023511.2-201ENST00000618803 211 ntBASIC19.98■□□□□ 0.79
PDGFBP01127 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFBP01127 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.98■□□□□ 0.79
PDGFBP01127 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFBP01127 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFBP01127 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFBP01127 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFBP01127 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFBP01127 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
PDGFBP01127 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFBP01127 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFBP01127 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFBP01127 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFBP01127 ATP5G2P1-201ENST00000433580 426 ntBASIC19.97■□□□□ 0.79
PDGFBP01127 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.97■□□□□ 0.79
PDGFBP01127 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFBP01127 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms