Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.93■□□□□ 0.94
ZBED1O96006 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
ZBED1O96006 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 PCDHAC2-203ENST00000615316 3011 ntBASIC20.93■□□□□ 0.94
ZBED1O96006 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.93■□□□□ 0.94
ZBED1O96006 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZBED1O96006 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ZBED1O96006 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZBED1O96006 AC124283.5-201ENST00000624661 1809 ntBASIC20.92■□□□□ 0.94
ZBED1O96006 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.92■□□□□ 0.94
ZBED1O96006 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
ZBED1O96006 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZBED1O96006 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZBED1O96006 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZBED1O96006 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
ZBED1O96006 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZBED1O96006 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
ZBED1O96006 PRORSD1P-201ENST00000295112 541 ntBASIC20.92■□□□□ 0.94
ZBED1O96006 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
ZBED1O96006 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.92■□□□□ 0.94
ZBED1O96006 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.92■□□□□ 0.94
ZBED1O96006 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
ZBED1O96006 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.92■□□□□ 0.94
ZBED1O96006 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
ZBED1O96006 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.92■□□□□ 0.94
ZBED1O96006 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ZBED1O96006 BX119927.1-201ENST00000636596 1552 ntBASIC20.92■□□□□ 0.94
ZBED1O96006 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZBED1O96006 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
ZBED1O96006 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZBED1O96006 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.92■□□□□ 0.94
ZBED1O96006 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZBED1O96006 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZBED1O96006 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZBED1O96006 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZBED1O96006 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.91■□□□□ 0.94
ZBED1O96006 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZBED1O96006 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.91■□□□□ 0.94
ZBED1O96006 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ZBED1O96006 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.91■□□□□ 0.94
ZBED1O96006 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.91■□□□□ 0.94
ZBED1O96006 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZBED1O96006 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ZBED1O96006 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZBED1O96006 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ZBED1O96006 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.91■□□□□ 0.94
ZBED1O96006 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZBED1O96006 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ZBED1O96006 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZBED1O96006 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.9■□□□□ 0.94
ZBED1O96006 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZBED1O96006 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZBED1O96006 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ZBED1O96006 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZBED1O96006 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ZBED1O96006 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZBED1O96006 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.9■□□□□ 0.94
ZBED1O96006 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZBED1O96006 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZBED1O96006 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZBED1O96006 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.9■□□□□ 0.94
ZBED1O96006 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
ZBED1O96006 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZBED1O96006 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ZBED1O96006 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZBED1O96006 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
ZBED1O96006 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZBED1O96006 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ZBED1O96006 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZBED1O96006 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZBED1O96006 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
ZBED1O96006 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.94
ZBED1O96006 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.89■□□□□ 0.94
ZBED1O96006 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZBED1O96006 RNF165-205ENST00000588679 2904 ntBASIC20.89■□□□□ 0.94
ZBED1O96006 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.89■□□□□ 0.94
ZBED1O96006 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
ZBED1O96006 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZBED1O96006 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.89■□□□□ 0.93
ZBED1O96006 AC099778.1-201ENST00000568593 1911 ntBASIC20.89■□□□□ 0.93
ZBED1O96006 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ZBED1O96006 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.89■□□□□ 0.93
ZBED1O96006 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZBED1O96006 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZBED1O96006 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.89■□□□□ 0.93
ZBED1O96006 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.89■□□□□ 0.93
ZBED1O96006 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.89■□□□□ 0.93
ZBED1O96006 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZBED1O96006 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZBED1O96006 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.89■□□□□ 0.93
ZBED1O96006 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ZBED1O96006 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZBED1O96006 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZBED1O96006 AC112907.3-201ENST00000577781 2400 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms