Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOX30O94993 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SOX30O94993 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX30O94993 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOX30O94993 ABHD17AP1-201ENST00000358206 933 ntBASIC18.42■□□□□ 0.54
SOX30O94993 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.42■□□□□ 0.54
SOX30O94993 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOX30O94993 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.42■□□□□ 0.54
SOX30O94993 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.42■□□□□ 0.54
SOX30O94993 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX30O94993 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.42■□□□□ 0.54
SOX30O94993 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.42■□□□□ 0.54
SOX30O94993 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX30O94993 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.42■□□□□ 0.54
SOX30O94993 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.42■□□□□ 0.54
SOX30O94993 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.42■□□□□ 0.54
SOX30O94993 HLA-B-256ENST00000639848 1089 ntBASIC18.42■□□□□ 0.54
SOX30O94993 AC133041.1-202ENST00000642053 222 ntBASIC18.42■□□□□ 0.54
SOX30O94993 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SOX30O94993 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SOX30O94993 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOX30O94993 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX30O94993 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.42■□□□□ 0.54
SOX30O94993 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SOX30O94993 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX30O94993 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.42■□□□□ 0.54
SOX30O94993 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SOX30O94993 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
SOX30O94993 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.42■□□□□ 0.54
SOX30O94993 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOX30O94993 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SOX30O94993 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX30O94993 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SOX30O94993 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX30O94993 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.41■□□□□ 0.54
SOX30O94993 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SOX30O94993 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX30O94993 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.41■□□□□ 0.54
SOX30O94993 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SOX30O94993 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.41■□□□□ 0.54
SOX30O94993 GUSBP6-202ENST00000438529 1198 ntBASIC18.41■□□□□ 0.54
SOX30O94993 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX30O94993 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.41■□□□□ 0.54
SOX30O94993 AL138781.1-201ENST00000566567 1274 ntBASIC18.41■□□□□ 0.54
SOX30O94993 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SOX30O94993 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SOX30O94993 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX30O94993 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX30O94993 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.41■□□□□ 0.54
SOX30O94993 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.41■□□□□ 0.54
SOX30O94993 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX30O94993 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SOX30O94993 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SOX30O94993 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.41■□□□□ 0.54
SOX30O94993 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.41■□□□□ 0.54
SOX30O94993 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX30O94993 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX30O94993 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.4■□□□□ 0.54
SOX30O94993 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.4■□□□□ 0.54
SOX30O94993 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SOX30O94993 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SOX30O94993 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SOX30O94993 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.4■□□□□ 0.54
SOX30O94993 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SOX30O94993 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SOX30O94993 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SOX30O94993 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.4■□□□□ 0.54
SOX30O94993 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SOX30O94993 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.39■□□□□ 0.54
SOX30O94993 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.39■□□□□ 0.54
SOX30O94993 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.39■□□□□ 0.53
SOX30O94993 AC112907.3-201ENST00000577781 2400 ntBASIC18.39■□□□□ 0.53
SOX30O94993 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.39■□□□□ 0.53
SOX30O94993 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.39■□□□□ 0.53
SOX30O94993 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX30O94993 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX30O94993 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX30O94993 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.39■□□□□ 0.53
SOX30O94993 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.39■□□□□ 0.53
SOX30O94993 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.39■□□□□ 0.53
SOX30O94993 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.39■□□□□ 0.53
SOX30O94993 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.39■□□□□ 0.53
SOX30O94993 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.39■□□□□ 0.53
SOX30O94993 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.39■□□□□ 0.53
SOX30O94993 MYC-209ENST00000641252 345 ntBASIC18.39■□□□□ 0.53
SOX30O94993 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SOX30O94993 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.39■□□□□ 0.53
SOX30O94993 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX30O94993 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX30O94993 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX30O94993 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SOX30O94993 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX30O94993 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.39■□□□□ 0.53
SOX30O94993 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX30O94993 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.39■□□□□ 0.53
SOX30O94993 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SOX30O94993 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.39■□□□□ 0.53
SOX30O94993 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SOX30O94993 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX30O94993 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms