Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM3O75382 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIM3O75382 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM3O75382 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM3O75382 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM3O75382 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM3O75382 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM3O75382 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM3O75382 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.42■□□□□ 0.54
TRIM3O75382 UNC93B4-201ENST00000505679 747 ntBASIC18.42■□□□□ 0.54
TRIM3O75382 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM3O75382 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIM3O75382 AC008403.3-201ENST00000598924 454 ntBASIC18.42■□□□□ 0.54
TRIM3O75382 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRIM3O75382 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM3O75382 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
TRIM3O75382 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM3O75382 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM3O75382 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM3O75382 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM3O75382 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
TRIM3O75382 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM3O75382 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRIM3O75382 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRIM3O75382 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRIM3O75382 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM3O75382 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TRIM3O75382 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM3O75382 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.41■□□□□ 0.54
TRIM3O75382 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM3O75382 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRIM3O75382 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRIM3O75382 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRIM3O75382 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM3O75382 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
TRIM3O75382 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRIM3O75382 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRIM3O75382 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM3O75382 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM3O75382 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM3O75382 FP700111.2-201ENST00000619190 1892 ntBASIC18.4■□□□□ 0.54
TRIM3O75382 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM3O75382 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM3O75382 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRIM3O75382 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM3O75382 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 SOX15-203ENST00000570788 1093 ntBASIC18.4■□□□□ 0.54
TRIM3O75382 AC005829.2-201ENST00000571422 1056 ntBASIC18.4■□□□□ 0.54
TRIM3O75382 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
TRIM3O75382 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM3O75382 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM3O75382 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM3O75382 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRIM3O75382 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM3O75382 AC073314.1-201ENST00000568729 2216 ntBASIC18.39■□□□□ 0.54
TRIM3O75382 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TRIM3O75382 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM3O75382 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRIM3O75382 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM3O75382 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM3O75382 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM3O75382 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM3O75382 KRT18P29-201ENST00000397031 1267 ntBASIC18.39■□□□□ 0.53
TRIM3O75382 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM3O75382 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM3O75382 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.39■□□□□ 0.53
TRIM3O75382 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM3O75382 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRIM3O75382 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM3O75382 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms