Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN3O60637 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSPAN3O60637 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.43■□□□□ 0.86
TSPAN3O60637 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.43■□□□□ 0.86
TSPAN3O60637 AL157384.1-201ENST00000445995 2473 ntBASIC20.43■□□□□ 0.86
TSPAN3O60637 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN3O60637 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TSPAN3O60637 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN3O60637 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.42■□□□□ 0.86
TSPAN3O60637 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN3O60637 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN3O60637 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN3O60637 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TSPAN3O60637 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TSPAN3O60637 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.42■□□□□ 0.86
TSPAN3O60637 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN3O60637 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.42■□□□□ 0.86
TSPAN3O60637 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TSPAN3O60637 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN3O60637 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN3O60637 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TSPAN3O60637 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TSPAN3O60637 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN3O60637 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN3O60637 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN3O60637 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN3O60637 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN3O60637 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN3O60637 RPS2P55-201ENST00000397318 883 ntBASIC20.41■□□□□ 0.86
TSPAN3O60637 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
TSPAN3O60637 AC107956.1-201ENST00000494359 873 ntBASIC20.41■□□□□ 0.86
TSPAN3O60637 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.41■□□□□ 0.86
TSPAN3O60637 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.41■□□□□ 0.86
TSPAN3O60637 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.41■□□□□ 0.86
TSPAN3O60637 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN3O60637 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN3O60637 AC018553.1-201ENST00000616682 1458 ntBASIC20.41■□□□□ 0.86
TSPAN3O60637 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TSPAN3O60637 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.41■□□□□ 0.86
TSPAN3O60637 BX119927.1-201ENST00000636596 1552 ntBASIC20.41■□□□□ 0.86
TSPAN3O60637 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN3O60637 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN3O60637 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSPAN3O60637 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TSPAN3O60637 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TSPAN3O60637 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TSPAN3O60637 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN3O60637 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN3O60637 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN3O60637 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TSPAN3O60637 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN3O60637 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.4■□□□□ 0.86
TSPAN3O60637 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TSPAN3O60637 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN3O60637 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TSPAN3O60637 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN3O60637 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.4■□□□□ 0.86
TSPAN3O60637 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TSPAN3O60637 SNORA78-201ENST00000459373 127 ntBASIC20.4■□□□□ 0.86
TSPAN3O60637 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN3O60637 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN3O60637 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN3O60637 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN3O60637 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.4■□□□□ 0.86
TSPAN3O60637 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.4■□□□□ 0.86
TSPAN3O60637 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN3O60637 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TSPAN3O60637 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TSPAN3O60637 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.39■□□□□ 0.86
TSPAN3O60637 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
TSPAN3O60637 AC116351.2-201ENST00000606540 1585 ntBASIC20.39■□□□□ 0.85
TSPAN3O60637 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN3O60637 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
TSPAN3O60637 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN3O60637 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN3O60637 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN3O60637 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.39■□□□□ 0.85
TSPAN3O60637 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.39■□□□□ 0.85
TSPAN3O60637 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN3O60637 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.39■□□□□ 0.85
TSPAN3O60637 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.39■□□□□ 0.85
TSPAN3O60637 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN3O60637 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.39■□□□□ 0.85
TSPAN3O60637 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.39■□□□□ 0.85
TSPAN3O60637 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN3O60637 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.39■□□□□ 0.85
TSPAN3O60637 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN3O60637 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.39■□□□□ 0.85
TSPAN3O60637 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN3O60637 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSPAN3O60637 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.38■□□□□ 0.85
TSPAN3O60637 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TSPAN3O60637 LINC01006-201ENST00000333319 2292 ntBASIC20.38■□□□□ 0.85
TSPAN3O60637 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSPAN3O60637 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TSPAN3O60637 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TSPAN3O60637 HTR7P1-201ENST00000538670 1336 ntBASIC20.38■□□□□ 0.85
TSPAN3O60637 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSPAN3O60637 KRT16P5-201ENST00000455284 522 ntBASIC20.38■□□□□ 0.85
TSPAN3O60637 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms