Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
KDELR3O43731 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KDELR3O43731 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KDELR3O43731 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.13■□□□□ 0.81
KDELR3O43731 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.13■□□□□ 0.81
KDELR3O43731 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
KDELR3O43731 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
KDELR3O43731 AL158047.1-201ENST00000445918 881 ntBASIC20.13■□□□□ 0.81
KDELR3O43731 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.13■□□□□ 0.81
KDELR3O43731 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.13■□□□□ 0.81
KDELR3O43731 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
KDELR3O43731 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.13■□□□□ 0.81
KDELR3O43731 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.13■□□□□ 0.81
KDELR3O43731 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.13■□□□□ 0.81
KDELR3O43731 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
KDELR3O43731 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
KDELR3O43731 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDELR3O43731 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.13■□□□□ 0.81
KDELR3O43731 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.12■□□□□ 0.81
KDELR3O43731 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 NBPF21P-201ENST00000425093 1451 ntBASIC20.12■□□□□ 0.81
KDELR3O43731 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.12■□□□□ 0.81
KDELR3O43731 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
KDELR3O43731 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.12■□□□□ 0.81
KDELR3O43731 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.12■□□□□ 0.81
KDELR3O43731 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.12■□□□□ 0.81
KDELR3O43731 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
KDELR3O43731 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.12■□□□□ 0.81
KDELR3O43731 AC110285.5-201ENST00000611501 352 ntBASIC20.12■□□□□ 0.81
KDELR3O43731 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.12■□□□□ 0.81
KDELR3O43731 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.12■□□□□ 0.81
KDELR3O43731 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.12■□□□□ 0.81
KDELR3O43731 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
KDELR3O43731 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KDELR3O43731 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
KDELR3O43731 AP006587.1-201ENST00000534129 1502 ntBASIC20.12■□□□□ 0.81
KDELR3O43731 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KDELR3O43731 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
KDELR3O43731 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
KDELR3O43731 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KDELR3O43731 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KDELR3O43731 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
KDELR3O43731 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.11■□□□□ 0.81
KDELR3O43731 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KDELR3O43731 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.11■□□□□ 0.81
KDELR3O43731 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.11■□□□□ 0.81
KDELR3O43731 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.11■□□□□ 0.81
KDELR3O43731 FAM197Y4-202ENST00000622692 608 ntBASIC20.11■□□□□ 0.81
KDELR3O43731 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KDELR3O43731 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
KDELR3O43731 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
KDELR3O43731 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KDELR3O43731 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KDELR3O43731 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KDELR3O43731 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.1■□□□□ 0.81
KDELR3O43731 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.1■□□□□ 0.81
KDELR3O43731 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.1■□□□□ 0.81
KDELR3O43731 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
KDELR3O43731 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.1■□□□□ 0.81
KDELR3O43731 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.1■□□□□ 0.81
KDELR3O43731 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
KDELR3O43731 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.1■□□□□ 0.81
KDELR3O43731 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.1■□□□□ 0.81
KDELR3O43731 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.1■□□□□ 0.81
KDELR3O43731 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.1■□□□□ 0.81
KDELR3O43731 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms