Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIPK2O43353 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIPK2O43353 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIPK2O43353 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.12■□□□□ 0.81
RIPK2O43353 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RIPK2O43353 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIPK2O43353 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 KRT16P6-202ENST00000425692 1426 ntBASIC20.11■□□□□ 0.81
RIPK2O43353 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
RIPK2O43353 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RIPK2O43353 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.11■□□□□ 0.81
RIPK2O43353 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.11■□□□□ 0.81
RIPK2O43353 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RIPK2O43353 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.11■□□□□ 0.81
RIPK2O43353 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RIPK2O43353 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RIPK2O43353 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.11■□□□□ 0.81
RIPK2O43353 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIPK2O43353 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.1■□□□□ 0.81
RIPK2O43353 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIPK2O43353 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RIPK2O43353 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIPK2O43353 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIPK2O43353 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RIPK2O43353 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RIPK2O43353 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.1■□□□□ 0.81
RIPK2O43353 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RIPK2O43353 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.1■□□□□ 0.81
RIPK2O43353 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.1■□□□□ 0.81
RIPK2O43353 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.1■□□□□ 0.81
RIPK2O43353 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RIPK2O43353 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIPK2O43353 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIPK2O43353 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.1■□□□□ 0.81
RIPK2O43353 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
RIPK2O43353 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIPK2O43353 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIPK2O43353 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIPK2O43353 CROCCP3-202ENST00000420820 1947 ntBASIC20.1■□□□□ 0.81
RIPK2O43353 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIPK2O43353 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIPK2O43353 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIPK2O43353 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.09■□□□□ 0.81
RIPK2O43353 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIPK2O43353 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.09■□□□□ 0.81
RIPK2O43353 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.09■□□□□ 0.81
RIPK2O43353 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIPK2O43353 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.09■□□□□ 0.81
RIPK2O43353 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RIPK2O43353 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RIPK2O43353 TERF1P2-201ENST00000583350 1212 ntBASIC20.09■□□□□ 0.81
RIPK2O43353 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIPK2O43353 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.09■□□□□ 0.81
RIPK2O43353 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RIPK2O43353 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
RIPK2O43353 AC004854.2-201ENST00000608450 1441 ntBASIC20.09■□□□□ 0.81
RIPK2O43353 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RIPK2O43353 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
RIPK2O43353 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RIPK2O43353 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.08■□□□□ 0.81
RIPK2O43353 AC120498.9-201ENST00000339021 3867 ntBASIC20.08■□□□□ 0.81
RIPK2O43353 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RIPK2O43353 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RIPK2O43353 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.08■□□□□ 0.81
RIPK2O43353 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RIPK2O43353 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.08■□□□□ 0.81
RIPK2O43353 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.08■□□□□ 0.81
RIPK2O43353 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RIPK2O43353 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.08■□□□□ 0.81
RIPK2O43353 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.08■□□□□ 0.81
RIPK2O43353 AL031963.3-201ENST00000606441 850 ntBASIC20.08■□□□□ 0.81
RIPK2O43353 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RIPK2O43353 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RIPK2O43353 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIPK2O43353 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.08■□□□□ 0.8
RIPK2O43353 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RIPK2O43353 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RIPK2O43353 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIPK2O43353 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK2O43353 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK2O43353 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK2O43353 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.07■□□□□ 0.8
RIPK2O43353 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK2O43353 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.07■□□□□ 0.8
RIPK2O43353 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms