Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
HMGB3O15347 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HMGB3O15347 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB3O15347 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB3O15347 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB3O15347 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGB3O15347 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
HMGB3O15347 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB3O15347 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB3O15347 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB3O15347 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
HMGB3O15347 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HMGB3O15347 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB3O15347 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGB3O15347 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGB3O15347 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HMGB3O15347 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB3O15347 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGB3O15347 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.93■□□□□ 0.14
HMGB3O15347 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB3O15347 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGB3O15347 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB3O15347 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB3O15347 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HMGB3O15347 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HMGB3O15347 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGB3O15347 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGB3O15347 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB3O15347 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB3O15347 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGB3O15347 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGB3O15347 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB3O15347 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGB3O15347 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB3O15347 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGB3O15347 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB3O15347 AC093484.2-201ENST00000580996 2166 ntBASIC15.92■□□□□ 0.14
HMGB3O15347 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB3O15347 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB3O15347 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
HMGB3O15347 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGB3O15347 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB3O15347 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
HMGB3O15347 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB3O15347 KRT16P3-201ENST00000439127 1283 ntBASIC15.92■□□□□ 0.14
HMGB3O15347 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGB3O15347 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB3O15347 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGB3O15347 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGB3O15347 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB3O15347 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.92■□□□□ 0.14
HMGB3O15347 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HMGB3O15347 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB3O15347 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HMGB3O15347 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGB3O15347 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
HMGB3O15347 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB3O15347 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB3O15347 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HMGB3O15347 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB3O15347 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGB3O15347 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HMGB3O15347 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGB3O15347 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HMGB3O15347 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.91■□□□□ 0.14
HMGB3O15347 AL356740.2-201ENST00000601559 647 ntBASIC15.91■□□□□ 0.14
HMGB3O15347 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGB3O15347 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
HMGB3O15347 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGB3O15347 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGB3O15347 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB3O15347 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
HMGB3O15347 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGB3O15347 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGB3O15347 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB3O15347 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB3O15347 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB3O15347 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB3O15347 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB3O15347 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
HMGB3O15347 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGB3O15347 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB3O15347 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms