Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.48■□□□□ 0.55
AP3D1O14617 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.48■□□□□ 0.55
AP3D1O14617 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
AP3D1O14617 CDCA4P2-201ENST00000441182 718 ntBASIC18.48■□□□□ 0.55
AP3D1O14617 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.48■□□□□ 0.55
AP3D1O14617 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.48■□□□□ 0.55
AP3D1O14617 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.48■□□□□ 0.55
AP3D1O14617 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
AP3D1O14617 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 AC008694.1-202ENST00000636953 945 ntBASIC18.48■□□□□ 0.55
AP3D1O14617 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.48■□□□□ 0.55
AP3D1O14617 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
AP3D1O14617 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.48■□□□□ 0.55
AP3D1O14617 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
AP3D1O14617 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
AP3D1O14617 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.47■□□□□ 0.55
AP3D1O14617 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
AP3D1O14617 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.47■□□□□ 0.55
AP3D1O14617 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.47■□□□□ 0.55
AP3D1O14617 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.47■□□□□ 0.55
AP3D1O14617 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.47■□□□□ 0.55
AP3D1O14617 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
AP3D1O14617 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.47■□□□□ 0.55
AP3D1O14617 AC100791.3-201ENST00000617619 330 ntBASIC18.47■□□□□ 0.55
AP3D1O14617 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.47■□□□□ 0.55
AP3D1O14617 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP3D1O14617 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
AP3D1O14617 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.46■□□□□ 0.55
AP3D1O14617 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
AP3D1O14617 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 TMEM179-206ENST00000616017 1645 ntBASIC18.46■□□□□ 0.55
AP3D1O14617 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.46■□□□□ 0.55
AP3D1O14617 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.46■□□□□ 0.55
AP3D1O14617 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.46■□□□□ 0.55
AP3D1O14617 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.46■□□□□ 0.55
AP3D1O14617 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
AP3D1O14617 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.46■□□□□ 0.55
AP3D1O14617 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.46■□□□□ 0.55
AP3D1O14617 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
AP3D1O14617 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.46■□□□□ 0.55
AP3D1O14617 OR10C1-204ENST00000622521 1039 ntBASIC18.46■□□□□ 0.55
AP3D1O14617 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.46■□□□□ 0.55
AP3D1O14617 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
AP3D1O14617 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP3D1O14617 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
AP3D1O14617 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
AP3D1O14617 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
AP3D1O14617 AL691432.2-201ENST00000607222 2038 ntBASIC18.45■□□□□ 0.54
AP3D1O14617 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
AP3D1O14617 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.45■□□□□ 0.54
AP3D1O14617 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP3D1O14617 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.45■□□□□ 0.54
AP3D1O14617 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
AP3D1O14617 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP3D1O14617 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP3D1O14617 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms