Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRIM38O00635 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRIM38O00635 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.9■□□□□ 0.78
TRIM38O00635 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TRIM38O00635 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 AC121338.2-201ENST00000622535 1744 ntBASIC19.9■□□□□ 0.78
TRIM38O00635 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRIM38O00635 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.9■□□□□ 0.78
TRIM38O00635 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.89■□□□□ 0.78
TRIM38O00635 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM38O00635 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM38O00635 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM38O00635 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM38O00635 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM38O00635 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM38O00635 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM38O00635 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM38O00635 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM38O00635 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM38O00635 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM38O00635 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TRIM38O00635 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRIM38O00635 AC007225.1-201ENST00000566331 1836 ntBASIC19.89■□□□□ 0.77
TRIM38O00635 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM38O00635 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRIM38O00635 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM38O00635 AC120498.8-201ENST00000614275 531 ntBASIC19.89■□□□□ 0.77
TRIM38O00635 AC006557.6-201ENST00000623071 864 ntBASIC19.89■□□□□ 0.77
TRIM38O00635 AC073912.3-201ENST00000624414 853 ntBASIC19.89■□□□□ 0.77
TRIM38O00635 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM38O00635 AL023875.1-201ENST00000640777 796 ntBASIC19.89■□□□□ 0.77
TRIM38O00635 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM38O00635 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM38O00635 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM38O00635 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM38O00635 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM38O00635 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
TRIM38O00635 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
TRIM38O00635 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TRIM38O00635 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM38O00635 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRIM38O00635 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.88■□□□□ 0.77
TRIM38O00635 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
TRIM38O00635 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
TRIM38O00635 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM38O00635 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.88■□□□□ 0.77
TRIM38O00635 AC124016.1-201ENST00000609552 612 ntBASIC19.88■□□□□ 0.77
TRIM38O00635 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRIM38O00635 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM38O00635 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
TRIM38O00635 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM38O00635 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM38O00635 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM38O00635 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM38O00635 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
TRIM38O00635 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
TRIM38O00635 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM38O00635 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM38O00635 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM38O00635 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM38O00635 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM38O00635 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM38O00635 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms