Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL21O00585 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL21O00585 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL21O00585 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL21O00585 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL21O00585 KRT16P6-202ENST00000425692 1426 ntBASIC17.49■□□□□ 0.39
CCL21O00585 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL21O00585 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCL21O00585 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.49■□□□□ 0.39
CCL21O00585 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCL21O00585 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CCL21O00585 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.49■□□□□ 0.39
CCL21O00585 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.49■□□□□ 0.39
CCL21O00585 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.49■□□□□ 0.39
CCL21O00585 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL21O00585 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.49■□□□□ 0.39
CCL21O00585 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL21O00585 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCL21O00585 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCL21O00585 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.49■□□□□ 0.39
CCL21O00585 AC116351.2-201ENST00000606540 1585 ntBASIC17.49■□□□□ 0.39
CCL21O00585 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL21O00585 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.48■□□□□ 0.39
CCL21O00585 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL21O00585 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.48■□□□□ 0.39
CCL21O00585 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 TFP1-202ENST00000475455 1573 ntBASIC17.48■□□□□ 0.39
CCL21O00585 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL21O00585 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL21O00585 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CCL21O00585 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL21O00585 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCL21O00585 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL21O00585 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL21O00585 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL21O00585 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.47■□□□□ 0.39
CCL21O00585 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.47■□□□□ 0.39
CCL21O00585 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL21O00585 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL21O00585 KRT18P16-201ENST00000510337 1294 ntBASIC17.47■□□□□ 0.39
CCL21O00585 AC022616.7-201ENST00000525383 220 ntBASIC17.47■□□□□ 0.39
CCL21O00585 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL21O00585 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCL21O00585 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 DPP3P2-201ENST00000416030 1696 ntBASIC17.47■□□□□ 0.39
CCL21O00585 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL21O00585 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL21O00585 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCL21O00585 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL21O00585 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL21O00585 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCL21O00585 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL21O00585 AC018553.1-201ENST00000616682 1458 ntBASIC17.46■□□□□ 0.39
CCL21O00585 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL21O00585 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCL21O00585 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL21O00585 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL21O00585 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.46■□□□□ 0.39
CCL21O00585 INGX-201ENST00000359239 846 ntBASIC17.46■□□□□ 0.39
CCL21O00585 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL21O00585 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL21O00585 HMGA1P5-201ENST00000412453 271 ntBASIC17.46■□□□□ 0.39
CCL21O00585 UPK3BP1-201ENST00000428678 509 ntBASIC17.46■□□□□ 0.39
CCL21O00585 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.46■□□□□ 0.39
CCL21O00585 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL21O00585 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.46■□□□□ 0.39
CCL21O00585 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL21O00585 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.46■□□□□ 0.39
CCL21O00585 AC091076.1-201ENST00000610741 619 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms