Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHL1O00533 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHL1O00533 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CHL1O00533 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHL1O00533 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
CHL1O00533 AL135905.2-201ENST00000584934 1404 ntBASIC25.56■■□□□ 1.68
CHL1O00533 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHL1O00533 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHL1O00533 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHL1O00533 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHL1O00533 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CHL1O00533 KRT18P16-201ENST00000510337 1294 ntBASIC25.56■■□□□ 1.68
CHL1O00533 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.56■■□□□ 1.68
CHL1O00533 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.56■■□□□ 1.68
CHL1O00533 AF186192.3-201ENST00000583427 947 ntBASIC25.56■■□□□ 1.68
CHL1O00533 AL049637.2-201ENST00000641778 930 ntBASIC25.56■■□□□ 1.68
CHL1O00533 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CHL1O00533 LINC01521-201ENST00000504184 1943 ntBASIC25.56■■□□□ 1.68
CHL1O00533 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHL1O00533 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.56■■□□□ 1.68
CHL1O00533 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHL1O00533 AP001271.2-201ENST00000624018 1556 ntBASIC25.56■■□□□ 1.68
CHL1O00533 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHL1O00533 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHL1O00533 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC25.56■■□□□ 1.68
CHL1O00533 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CHL1O00533 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CHL1O00533 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.55■■□□□ 1.68
CHL1O00533 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHL1O00533 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC25.55■■□□□ 1.68
CHL1O00533 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHL1O00533 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHL1O00533 YBX1P10-201ENST00000444752 975 ntBASIC25.55■■□□□ 1.68
CHL1O00533 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC25.55■■□□□ 1.68
CHL1O00533 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC25.55■■□□□ 1.68
CHL1O00533 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHL1O00533 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHL1O00533 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CHL1O00533 AC113410.3-201ENST00000623366 203 ntBASIC25.55■■□□□ 1.68
CHL1O00533 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHL1O00533 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC25.55■■□□□ 1.68
CHL1O00533 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CHL1O00533 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHL1O00533 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC25.55■■□□□ 1.68
CHL1O00533 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CHL1O00533 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CHL1O00533 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHL1O00533 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CHL1O00533 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
CHL1O00533 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
CHL1O00533 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHL1O00533 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHL1O00533 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHL1O00533 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHL1O00533 MIR4497-201ENST00000583208 89 ntBASIC25.54■■□□□ 1.68
CHL1O00533 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.54■■□□□ 1.68
CHL1O00533 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC25.54■■□□□ 1.68
CHL1O00533 GOLGA2P11-201ENST00000562660 1621 ntBASIC25.54■■□□□ 1.68
CHL1O00533 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHL1O00533 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CHL1O00533 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC25.54■■□□□ 1.68
CHL1O00533 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHL1O00533 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC25.54■■□□□ 1.68
CHL1O00533 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHL1O00533 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CHL1O00533 TCF3P1-201ENST00000423021 1937 ntBASIC25.53■■□□□ 1.68
CHL1O00533 AC009237.14-201ENST00000609975 1594 ntBASIC25.53■■□□□ 1.68
CHL1O00533 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHL1O00533 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHL1O00533 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHL1O00533 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.53■■□□□ 1.68
CHL1O00533 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHL1O00533 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHL1O00533 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.53■■□□□ 1.68
CHL1O00533 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25.53■■□□□ 1.68
CHL1O00533 AL353708.3-201ENST00000610272 989 ntBASIC25.53■■□□□ 1.68
CHL1O00533 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC25.53■■□□□ 1.68
CHL1O00533 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC25.53■■□□□ 1.68
CHL1O00533 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
CHL1O00533 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHL1O00533 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHL1O00533 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
CHL1O00533 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.53■■□□□ 1.68
CHL1O00533 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHL1O00533 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHL1O00533 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CHL1O00533 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CHL1O00533 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CHL1O00533 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHL1O00533 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CHL1O00533 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
CHL1O00533 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC25.52■■□□□ 1.68
CHL1O00533 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.52■■□□□ 1.68
CHL1O00533 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.52■■□□□ 1.68
CHL1O00533 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHL1O00533 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CHL1O00533 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.68
CHL1O00533 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CHL1O00533 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHL1O00533 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms