Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.02■□□□□ 0.8
AP3B1O00203 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.02■□□□□ 0.79
AP3B1O00203 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
AP3B1O00203 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP3B1O00203 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.02■□□□□ 0.79
AP3B1O00203 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
AP3B1O00203 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP3B1O00203 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP3B1O00203 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP3B1O00203 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP3B1O00203 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP3B1O00203 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.01■□□□□ 0.79
AP3B1O00203 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3B1O00203 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
AP3B1O00203 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.01■□□□□ 0.79
AP3B1O00203 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP3B1O00203 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3B1O00203 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
AP3B1O00203 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3B1O00203 MIR663A-201ENST00000385250 93 ntBASIC20.01■□□□□ 0.79
AP3B1O00203 AL390719.1-204ENST00000412397 1219 ntBASIC20.01■□□□□ 0.79
AP3B1O00203 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP3B1O00203 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP3B1O00203 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
AP3B1O00203 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
AP3B1O00203 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
AP3B1O00203 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP3B1O00203 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3B1O00203 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.01■□□□□ 0.79
AP3B1O00203 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3B1O00203 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20■□□□□ 0.79
AP3B1O00203 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
AP3B1O00203 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20■□□□□ 0.79
AP3B1O00203 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP3B1O00203 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
AP3B1O00203 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
AP3B1O00203 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP3B1O00203 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP3B1O00203 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP3B1O00203 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP3B1O00203 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20■□□□□ 0.79
AP3B1O00203 AC073210.2-201ENST00000430369 194 ntBASIC20■□□□□ 0.79
AP3B1O00203 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20■□□□□ 0.79
AP3B1O00203 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20■□□□□ 0.79
AP3B1O00203 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20■□□□□ 0.79
AP3B1O00203 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20■□□□□ 0.79
AP3B1O00203 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20■□□□□ 0.79
AP3B1O00203 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20■□□□□ 0.79
AP3B1O00203 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20■□□□□ 0.79
AP3B1O00203 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20■□□□□ 0.79
AP3B1O00203 RAP2CP1-201ENST00000605103 478 ntBASIC20■□□□□ 0.79
AP3B1O00203 AL121832.2-201ENST00000610979 668 ntBASIC20■□□□□ 0.79
AP3B1O00203 AL050303.2-201ENST00000619798 666 ntBASIC20■□□□□ 0.79
AP3B1O00203 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20■□□□□ 0.79
AP3B1O00203 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20■□□□□ 0.79
AP3B1O00203 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP3B1O00203 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.99■□□□□ 0.79
AP3B1O00203 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.99■□□□□ 0.79
AP3B1O00203 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP3B1O00203 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.99■□□□□ 0.79
AP3B1O00203 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.99■□□□□ 0.79
AP3B1O00203 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP3B1O00203 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP3B1O00203 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.99■□□□□ 0.79
AP3B1O00203 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.99■□□□□ 0.79
AP3B1O00203 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP3B1O00203 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP3B1O00203 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.99■□□□□ 0.79
AP3B1O00203 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP3B1O00203 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
AP3B1O00203 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP3B1O00203 AL158211.5-201ENST00000623583 2518 ntBASIC19.99■□□□□ 0.79
AP3B1O00203 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP3B1O00203 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP3B1O00203 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP3B1O00203 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP3B1O00203 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
AP3B1O00203 MIR935-201ENST00000401179 91 ntBASIC19.98■□□□□ 0.79
AP3B1O00203 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.98■□□□□ 0.79
AP3B1O00203 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.98■□□□□ 0.79
AP3B1O00203 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP3B1O00203 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP3B1O00203 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.98■□□□□ 0.79
AP3B1O00203 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP3B1O00203 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.98■□□□□ 0.79
AP3B1O00203 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
AP3B1O00203 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.98■□□□□ 0.79
AP3B1O00203 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.98■□□□□ 0.79
AP3B1O00203 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP3B1O00203 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP3B1O00203 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP3B1O00203 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.97■□□□□ 0.79
AP3B1O00203 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
AP3B1O00203 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.97■□□□□ 0.79
AP3B1O00203 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms