Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 DUX4L28-201ENST00000623687 678 ntBASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 CHML-204ENST00000638121 920 ntTSL 2 BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CHKB-CPT1BH3BT56 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CHKB-CPT1BH3BT56 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CHKB-CPT1BH3BT56 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC11.02□□□□□ -0.64
CHKB-CPT1BH3BT56 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
CHKB-CPT1BH3BT56 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.02□□□□□ -0.64
CHKB-CPT1BH3BT56 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
CHKB-CPT1BH3BT56 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CHKB-CPT1BH3BT56 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 SUZ12P1-203ENST00000578195 985 ntBASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 AP005212.1-201ENST00000581547 1997 ntBASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 AL161772.1-201ENST00000610494 4412 ntBASIC11.02□□□□□ -0.65
CHKB-CPT1BH3BT56 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 LTF-203ENST00000426532 2494 ntTSL 2 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC11.01□□□□□ -0.65
CHKB-CPT1BH3BT56 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms