Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC083906.2-201ENST00000511578 360 ntBASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV6-4A0A1B0GX49 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 SLC29A4P1-201ENST00000398760 971 ntBASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 MIPEPP3-201ENST00000412105 444 ntBASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC073210.2-201ENST00000430369 194 ntBASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC092118.2-201ENST00000613495 667 ntBASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV6-4A0A1B0GX49 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV6-4A0A1B0GX49 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
TRBV6-4A0A1B0GX49 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.96□□□□□ -0.18
TRBV6-4A0A1B0GX49 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV6-4A0A1B0GX49 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms