Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 AC092666.2-201ENST00000613287 246 ntBASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRGV4A0A0C4DH28 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 HLA-G-202ENST00000376815 851 ntBASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 HLA-G-203ENST00000376818 1127 ntBASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 SLC29A4P1-201ENST00000398760 971 ntBASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 BX276092.2-201ENST00000417668 665 ntBASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 AL121832.2-201ENST00000610979 668 ntBASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV4A0A0C4DH28 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 KRT8P20-201ENST00000423953 1409 ntBASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 KRT16P6-202ENST00000425692 1426 ntBASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV4A0A0C4DH28 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
TRGV4A0A0C4DH28 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
TRGV4A0A0C4DH28 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRGV4A0A0C4DH28 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.21□□□□□ -0.14
TRGV4A0A0C4DH28 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRGV4A0A0C4DH28 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRGV4A0A0C4DH28 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
TRGV4A0A0C4DH28 KRT17P1-201ENST00000399211 1546 ntBASIC14.2□□□□□ -0.14
TRGV4A0A0C4DH28 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
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