Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.34■■□□□ 1.65
LOC102724428A0A0B4J2F2 SAPCD2P2-201ENST00000431719 1174 ntBASIC25.34■■□□□ 1.65
LOC102724428A0A0B4J2F2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC25.34■■□□□ 1.65
LOC102724428A0A0B4J2F2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.34■■□□□ 1.65
LOC102724428A0A0B4J2F2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LOC102724428A0A0B4J2F2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LOC102724428A0A0B4J2F2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC25.34■■□□□ 1.65
LOC102724428A0A0B4J2F2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
LOC102724428A0A0B4J2F2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
LOC102724428A0A0B4J2F2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
LOC102724428A0A0B4J2F2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC25.34■■□□□ 1.65
LOC102724428A0A0B4J2F2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LOC102724428A0A0B4J2F2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
LOC102724428A0A0B4J2F2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LOC102724428A0A0B4J2F2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC25.33■■□□□ 1.65
LOC102724428A0A0B4J2F2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
LOC102724428A0A0B4J2F2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LOC102724428A0A0B4J2F2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
LOC102724428A0A0B4J2F2 RNF152P1-201ENST00000397754 604 ntBASIC25.33■■□□□ 1.65
LOC102724428A0A0B4J2F2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LOC102724428A0A0B4J2F2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
LOC102724428A0A0B4J2F2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LOC102724428A0A0B4J2F2 HLA-A-209ENST00000638375 975 ntBASIC25.33■■□□□ 1.65
LOC102724428A0A0B4J2F2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.33■■□□□ 1.65
LOC102724428A0A0B4J2F2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
LOC102724428A0A0B4J2F2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 AC096733.2-201ENST00000609937 1394 ntBASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 MFAP1P1-201ENST00000442257 1255 ntBASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 AC116562.4-202ENST00000641738 218 ntBASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LOC102724428A0A0B4J2F2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 KRT16P6-202ENST00000425692 1426 ntBASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 AC004951.3-201ENST00000418645 1148 ntBASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 YBX1P2-201ENST00000489612 999 ntBASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LOC102724428A0A0B4J2F2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 FP700111.2-201ENST00000619190 1892 ntBASIC25.3■■□□□ 1.64
LOC102724428A0A0B4J2F2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC25.29■■□□□ 1.64
LOC102724428A0A0B4J2F2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms