Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC120498.9-201ENST00000339021 3867 ntBASIC17.24■□□□□ 0.35
TRAV1-2A0A0B4J238 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV1-2A0A0B4J238 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRAV1-2A0A0B4J238 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRAV1-2A0A0B4J238 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV1-2A0A0B4J238 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRAV1-2A0A0B4J238 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV1-2A0A0B4J238 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV1-2A0A0B4J238 AC026471.1-201ENST00000564629 3026 ntBASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV1-2A0A0B4J238 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 AF213884.3-201ENST00000563833 479 ntBASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV1-2A0A0B4J238 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV1-2A0A0B4J238 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV1-2A0A0B4J238 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
TRAV1-2A0A0B4J238 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV1-2A0A0B4J238 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 AL136967.2-201ENST00000623968 743 ntBASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV1-2A0A0B4J238 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms