Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 AC015524.1-201ENST00000491585 472 ntBASIC6.03□□□□□ -1.44
COL21A1Q96P44 RPL5P14-201ENST00000494197 878 ntBASIC6.03□□□□□ -1.44
COL21A1Q96P44 AC022206.1-201ENST00000495947 347 ntBASIC6.03□□□□□ -1.44
COL21A1Q96P44 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL21A1Q96P44 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.03□□□□□ -1.44
COL21A1Q96P44 AL162377.2-201ENST00000624532 337 ntBASIC6.03□□□□□ -1.44
COL21A1Q96P44 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL21A1Q96P44 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL21A1Q96P44 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL21A1Q96P44 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL21A1Q96P44 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.03□□□□□ -1.44
COL21A1Q96P44 AC110373.1-201ENST00000505994 3505 ntBASIC6.03□□□□□ -1.44
COL21A1Q96P44 AC217777.1-201ENST00000570034 1471 ntBASIC6.02□□□□□ -1.44
COL21A1Q96P44 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
COL21A1Q96P44 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL21A1Q96P44 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL21A1Q96P44 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL21A1Q96P44 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 AC245036.1-201ENST00000391727 309 ntBASIC6.02□□□□□ -1.45
COL21A1Q96P44 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 UBTFL2-201ENST00000411859 1191 ntBASIC6.02□□□□□ -1.45
COL21A1Q96P44 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 DNAJC19P5-201ENST00000443295 316 ntBASIC6.02□□□□□ -1.45
COL21A1Q96P44 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 AC128716.1-201ENST00000475129 166 ntBASIC6.02□□□□□ -1.45
COL21A1Q96P44 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 SYPL1P2-201ENST00000582878 727 ntBASIC6.02□□□□□ -1.45
COL21A1Q96P44 AC233702.7-202ENST00000582941 211 ntBASIC6.02□□□□□ -1.45
COL21A1Q96P44 AL008582.1-201ENST00000609612 442 ntBASIC6.02□□□□□ -1.45
COL21A1Q96P44 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL21A1Q96P44 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL21A1Q96P44 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL21A1Q96P44 AC093297.3-201ENST00000607056 2517 ntBASIC6.02□□□□□ -1.45
COL21A1Q96P44 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL21A1Q96P44 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL21A1Q96P44 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.02□□□□□ -1.45
COL21A1Q96P44 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL21A1Q96P44 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 RN7SKP184-201ENST00000362348 333 ntBASIC6.01□□□□□ -1.45
COL21A1Q96P44 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 RPL23AP85-201ENST00000421838 433 ntBASIC6.01□□□□□ -1.45
COL21A1Q96P44 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 AC009237.1-201ENST00000442127 744 ntBASIC6.01□□□□□ -1.45
COL21A1Q96P44 AL020997.1-201ENST00000446554 349 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms