Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL136131.3-201ENST00000607600 188 ntBASIC6.17□□□□□ -1.42
RIF1Q5UIP0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RIF1Q5UIP0 AC023421.1-201ENST00000590535 1785 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 HSP90AB7P-201ENST00000450068 2454 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 PIP5K1P2-201ENST00000437005 1120 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 SETP21-201ENST00000514799 892 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AC021146.10-201ENST00000515628 706 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 OR4A21P-201ENST00000532759 944 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AC006530.1-201ENST00000555980 571 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AC090616.1-201ENST00000583895 447 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AL161729.2-201ENST00000605700 456 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AL512329.2-201ENST00000607350 548 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 uc_338.18-201ENST00000615451 175 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AC245389.2-201ENST00000616023 576 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AC242843.1-201ENST00000618702 573 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AL138690.1-201ENST00000568811 2243 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 GAPDHP51-201ENST00000426454 1000 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 HIGD1AP8-201ENST00000453927 274 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 SIAH1P1-201ENST00000479411 923 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 RN7SL817P-201ENST00000480777 288 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 EEF1B2P2-201ENST00000519625 676 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AL022394.1-201ENST00000606979 292 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 AL359513.1-201ENST00000614364 557 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.16□□□□□ -1.42
RIF1Q5UIP0 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RIF1Q5UIP0 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RIF1Q5UIP0 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RIF1Q5UIP0 MTCO1P25-201ENST00000414449 1799 ntBASIC6.15□□□□□ -1.42
RIF1Q5UIP0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.15□□□□□ -1.42
RIF1Q5UIP0 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RIF1Q5UIP0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RIF1Q5UIP0 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RIF1Q5UIP0 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
RIF1Q5UIP0 AL139128.1-201ENST00000413921 941 ntBASIC6.15□□□□□ -1.42
RIF1Q5UIP0 AL772161.1-201ENST00000439130 476 ntBASIC6.15□□□□□ -1.42
RIF1Q5UIP0 TPT1P12-201ENST00000448968 492 ntBASIC6.15□□□□□ -1.42
RIF1Q5UIP0 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.15□□□□□ -1.42
RIF1Q5UIP0 AC007537.2-201ENST00000472093 511 ntBASIC6.15□□□□□ -1.42
RIF1Q5UIP0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.15□□□□□ -1.42
RIF1Q5UIP0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.15□□□□□ -1.42
RIF1Q5UIP0 UBE2CP1-201ENST00000557130 554 ntBASIC6.15□□□□□ -1.42
RIF1Q5UIP0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RIF1Q5UIP0 AC040162.2-201ENST00000573092 157 ntBASIC6.15□□□□□ -1.42
RIF1Q5UIP0 MIR4697-201ENST00000582977 78 ntBASIC6.15□□□□□ -1.42
RIF1Q5UIP0 AC010998.3-201ENST00000613871 631 ntBASIC6.15□□□□□ -1.42
RIF1Q5UIP0 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
RIF1Q5UIP0 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
RIF1Q5UIP0 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.15□□□□□ -1.43
RIF1Q5UIP0 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.15□□□□□ -1.43
RIF1Q5UIP0 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
RIF1Q5UIP0 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.15□□□□□ -1.43
RIF1Q5UIP0 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RIF1Q5UIP0 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
RIF1Q5UIP0 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RIF1Q5UIP0 AC005532.2-201ENST00000467154 373 ntBASIC6.15□□□□□ -1.43
RIF1Q5UIP0 AC092905.1-201ENST00000467527 949 ntBASIC6.15□□□□□ -1.43
RIF1Q5UIP0 RN7SL222P-201ENST00000476452 299 ntBASIC6.15□□□□□ -1.43
RIF1Q5UIP0 RN7SKP66-201ENST00000516681 231 ntBASIC6.15□□□□□ -1.43
RIF1Q5UIP0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.15□□□□□ -1.43
RIF1Q5UIP0 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.15□□□□□ -1.43
RIF1Q5UIP0 AL049840.5-201ENST00000602827 552 ntBASIC6.15□□□□□ -1.43
RIF1Q5UIP0 CASC19-264ENST00000641912 1184 ntBASIC6.15□□□□□ -1.43
RIF1Q5UIP0 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms