Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC7.69□□□□□ -1.18
RHBDL3P58872 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.69□□□□□ -1.18
RHBDL3P58872 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.69□□□□□ -1.18
RHBDL3P58872 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.69□□□□□ -1.18
RHBDL3P58872 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.69□□□□□ -1.18
RHBDL3P58872 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.69□□□□□ -1.18
RHBDL3P58872 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.69□□□□□ -1.18
RHBDL3P58872 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.69□□□□□ -1.18
RHBDL3P58872 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RHBDL3P58872 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
RHBDL3P58872 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RHBDL3P58872 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.69□□□□□ -1.18
RHBDL3P58872 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC7.69□□□□□ -1.18
RHBDL3P58872 MIR8089-201ENST00000620165 82 ntBASIC7.69□□□□□ -1.18
RHBDL3P58872 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RHBDL3P58872 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RHBDL3P58872 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RHBDL3P58872 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
RHBDL3P58872 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.69□□□□□ -1.18
RHBDL3P58872 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RHBDL3P58872 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.68□□□□□ -1.18
RHBDL3P58872 AC104966.1-201ENST00000467010 1464 ntBASIC7.68□□□□□ -1.18
RHBDL3P58872 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
RHBDL3P58872 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
RHBDL3P58872 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
RHBDL3P58872 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.68□□□□□ -1.18
RHBDL3P58872 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RHBDL3P58872 RNU1-46P-201ENST00000384425 164 ntBASIC7.68□□□□□ -1.18
RHBDL3P58872 NPM1P10-201ENST00000398310 865 ntBASIC7.68□□□□□ -1.18
RHBDL3P58872 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.68□□□□□ -1.18
RHBDL3P58872 SNORA77.2-201ENST00000408571 112 ntBASIC7.68□□□□□ -1.18
RHBDL3P58872 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.68□□□□□ -1.18
RHBDL3P58872 AC112492.2-201ENST00000432774 1030 ntBASIC7.68□□□□□ -1.18
RHBDL3P58872 RAB9AP5-201ENST00000437794 597 ntBASIC7.68□□□□□ -1.18
RHBDL3P58872 RPL12P11-201ENST00000439970 501 ntBASIC7.68□□□□□ -1.18
RHBDL3P58872 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.68□□□□□ -1.18
RHBDL3P58872 RAB9AP2-201ENST00000443911 597 ntBASIC7.68□□□□□ -1.18
RHBDL3P58872 AL356390.1-201ENST00000455684 397 ntBASIC7.68□□□□□ -1.18
RHBDL3P58872 RN7SL643P-201ENST00000471845 291 ntBASIC7.68□□□□□ -1.18
RHBDL3P58872 AK5-208ENST00000478255 556 ntTSL 2 BASIC7.68□□□□□ -1.18
RHBDL3P58872 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC7.68□□□□□ -1.18
RHBDL3P58872 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RHBDL3P58872 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.68□□□□□ -1.18
RHBDL3P58872 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.68□□□□□ -1.18
RHBDL3P58872 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.68□□□□□ -1.18
RHBDL3P58872 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.68□□□□□ -1.18
RHBDL3P58872 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RHBDL3P58872 RN7SL366P-201ENST00000577957 292 ntBASIC7.68□□□□□ -1.18
RHBDL3P58872 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.68□□□□□ -1.18
RHBDL3P58872 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.68□□□□□ -1.18
RHBDL3P58872 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.68□□□□□ -1.18
RHBDL3P58872 AP001052.1-201ENST00000626421 99 ntBASIC7.68□□□□□ -1.18
RHBDL3P58872 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.68□□□□□ -1.18
RHBDL3P58872 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.68□□□□□ -1.18
RHBDL3P58872 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.68□□□□□ -1.18
RHBDL3P58872 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RHBDL3P58872 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RHBDL3P58872 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
RHBDL3P58872 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RHBDL3P58872 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RHBDL3P58872 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.68□□□□□ -1.18
RHBDL3P58872 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
RHBDL3P58872 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RHBDL3P58872 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RHBDL3P58872 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RHBDL3P58872 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.67□□□□□ -1.18
RHBDL3P58872 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.67□□□□□ -1.18
RHBDL3P58872 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RHBDL3P58872 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RHBDL3P58872 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RHBDL3P58872 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RHBDL3P58872 AC110597.1-201ENST00000562669 3176 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
RHBDL3P58872 RNU6-386P-201ENST00000362650 107 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.67□□□□□ -1.18
RHBDL3P58872 AL139039.2-201ENST00000407436 479 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 AL356968.2-201ENST00000412769 1257 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.67□□□□□ -1.18
RHBDL3P58872 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.67□□□□□ -1.18
RHBDL3P58872 AC003989.1-201ENST00000434569 565 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 PNKDP1-201ENST00000435914 430 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 AC110602.1-201ENST00000437414 318 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 PMS2P9-201ENST00000441237 515 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.67□□□□□ -1.18
RHBDL3P58872 C1DP3-201ENST00000455013 423 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.67□□□□□ -1.18
RHBDL3P58872 AC105420.1-201ENST00000504389 582 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 OR7E99P-201ENST00000505750 922 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.67□□□□□ -1.18
RHBDL3P58872 AC117525.1-201ENST00000515228 503 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.67□□□□□ -1.18
RHBDL3P58872 NPIPB14P-203ENST00000532298 987 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.67□□□□□ -1.18
RHBDL3P58872 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.67□□□□□ -1.18
RHBDL3P58872 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.67□□□□□ -1.18
RHBDL3P58872 NDUFA5P11-201ENST00000567995 343 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 AC002310.3-201ENST00000569728 723 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 AC005726.4-201ENST00000582858 458 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 AC079315.1-201ENST00000602952 623 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms