Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 AC037479.1-201ENST00000558361 625 ntBASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 AC008555.7-201ENST00000605008 583 ntBASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 AL392048.1-201ENST00000613946 534 ntBASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 AC010325.3-201ENST00000641084 394 ntBASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 LINC02211-204ENST00000642024 1070 ntBASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 AC005538.2-201ENST00000623215 1864 ntBASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 MAPK10-279ENST00000641157 2449 ntBASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 API5P1-201ENST00000424316 1510 ntBASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC8.44□□□□□ -1.06
TMEM88BA6NKF7 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 ELL2P3-201ENST00000457883 1602 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 BX005019.1-201ENST00000561881 1810 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 Y_RNA.201-201ENST00000364052 96 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 Y_RNA.436-201ENST00000384097 102 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 RNU6-648P-201ENST00000410190 107 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 RN7SKP229-201ENST00000410465 302 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 Z75741.2-201ENST00000417272 1167 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 SLC9B1P4-201ENST00000421957 1288 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 NANOGP2-201ENST00000435391 727 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 ARL4AP3-201ENST00000441452 574 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 MTCYBP42-201ENST00000444653 1130 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC092570.2-201ENST00000452117 1143 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AKR1D1P1-201ENST00000457236 936 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AL133477.1-201ENST00000457472 514 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 USP9YP25-201ENST00000457708 443 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 RPL34P34-201ENST00000465389 354 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC025459.1-201ENST00000504072 156 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 RNU6-1129P-201ENST00000515964 104 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 RN7SKP196-201ENST00000516267 345 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 LECT2-205ENST00000522943 574 ntTSL 3 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC105275.2-201ENST00000567907 711 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC002310.3-201ENST00000569728 723 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC022662.1-201ENST00000580252 331 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC023513.1-201ENST00000604396 691 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AL136097.3-201ENST00000611097 505 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 uc_338.31-201ENST00000615595 186 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 MIR6886-201ENST00000619864 61 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC103706.2-201ENST00000638080 240 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC006116.1-201ENST00000587908 2171 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms