Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CDK5RAP3Q96JB5 AC114546.4-201ENST00000624413 369 ntBASIC7.4□□□□□ -1.22
CDK5RAP3Q96JB5 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP3Q96JB5 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.4□□□□□ -1.22
CDK5RAP3Q96JB5 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.4□□□□□ -1.22
CDK5RAP3Q96JB5 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP3Q96JB5 RNF19BPY-201ENST00000458209 1550 ntBASIC7.4□□□□□ -1.22
CDK5RAP3Q96JB5 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CDK5RAP3Q96JB5 AC090220.1-201ENST00000593078 1699 ntBASIC7.4□□□□□ -1.23
CDK5RAP3Q96JB5 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CDK5RAP3Q96JB5 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
CDK5RAP3Q96JB5 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.4□□□□□ -1.23
CDK5RAP3Q96JB5 AC009779.8-201ENST00000641684 4384 ntBASIC7.4□□□□□ -1.23
CDK5RAP3Q96JB5 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 DOCK11P1-201ENST00000553480 5932 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 MAPK10-357ENST00000641831 2858 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 PABPC1P8-201ENST00000452851 2086 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 FAM32BP-201ENST00000344033 333 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 RNA5SP188-201ENST00000362916 129 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 SPATA20P1-201ENST00000423089 438 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 NPM1P9-201ENST00000453156 844 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AKR1D1P1-201ENST00000457236 936 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AC021269.1-201ENST00000526860 705 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 RN7SL208P-201ENST00000577964 296 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AC097467.4-201ENST00000605504 141 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 SNORD96A-201ENST00000606577 79 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AC020978.9-201ENST00000624380 1141 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 AC004808.2-201ENST00000627965 773 ntBASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP3Q96JB5 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AC062022.1-201ENST00000451026 1684 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 RNA5SP140-201ENST00000364524 92 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 SNORA7A-201ENST00000384765 139 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AL359092.1-201ENST00000417156 265 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AL589794.1-201ENST00000424971 390 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 SDR42E1P3-201ENST00000438345 502 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AC002075.1-201ENST00000457396 676 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 SEPT7P6-201ENST00000469999 1143 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AC022415.1-202ENST00000486612 523 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 OR2A3P-201ENST00000493774 953 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 NREP-217ENST00000509025 987 ntTSL 3 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 RNU2-45P-201ENST00000516068 187 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AC131935.1-201ENST00000524621 333 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AC005519.1-201ENST00000554490 601 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 OR4C49P-201ENST00000563891 900 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 CCDC58P1-201ENST00000578567 430 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 OOSP1P2-201ENST00000579644 351 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 ADAD1P2-201ENST00000588476 646 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms