Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC135983.3-201ENST00000528049 1226 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.73□□□□□ -1.49
H3F3AP84243 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.73□□□□□ -1.49
H3F3AP84243 AC008055.1-201ENST00000547032 609 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.73□□□□□ -1.49
H3F3AP84243 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.73□□□□□ -1.49
H3F3AP84243 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.73□□□□□ -1.49
H3F3AP84243 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.73□□□□□ -1.49
H3F3AP84243 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.73□□□□□ -1.49
H3F3AP84243 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.73□□□□□ -1.49
H3F3AP84243 AL589765.6-201ENST00000601909 549 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.73□□□□□ -1.49
H3F3AP84243 AC015819.1-201ENST00000613588 663 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 AC099654.15-201ENST00000639802 509 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.73□□□□□ -1.49
H3F3AP84243 AL662795.2-201ENST00000624252 3706 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.73□□□□□ -1.49
H3F3AP84243 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.73□□□□□ -1.49
H3F3AP84243 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.73□□□□□ -1.49
H3F3AP84243 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.73□□□□□ -1.49
H3F3AP84243 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.73□□□□□ -1.49
H3F3AP84243 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.72□□□□□ -1.49
H3F3AP84243 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
H3F3AP84243 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.72□□□□□ -1.49
H3F3AP84243 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.72□□□□□ -1.49
H3F3AP84243 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
H3F3AP84243 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 AL591848.4-201ENST00000567832 3472 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
H3F3AP84243 SNORA64.3-201ENST00000365647 134 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
H3F3AP84243 U3.43-201ENST00000410734 213 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.72□□□□□ -1.49
H3F3AP84243 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.72□□□□□ -1.49
H3F3AP84243 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.72□□□□□ -1.49
H3F3AP84243 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.72□□□□□ -1.49
H3F3AP84243 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.72□□□□□ -1.49
H3F3AP84243 OR2L9P-201ENST00000444456 913 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.72□□□□□ -1.49
H3F3AP84243 VN1R38P-201ENST00000450265 887 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.72□□□□□ -1.49
H3F3AP84243 RN7SL643P-201ENST00000471845 291 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 RN7SL836P-201ENST00000476140 296 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.72□□□□□ -1.49
H3F3AP84243 AC093816.1-201ENST00000515076 913 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 SNORA74.1-201ENST00000516320 180 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 COX6B1P4-201ENST00000519826 484 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 IGHV4-55-201ENST00000520889 368 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.72□□□□□ -1.49
H3F3AP84243 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.72□□□□□ -1.49
H3F3AP84243 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.72□□□□□ -1.49
H3F3AP84243 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.72□□□□□ -1.49
H3F3AP84243 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.72□□□□□ -1.49
H3F3AP84243 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.72□□□□□ -1.49
H3F3AP84243 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.72□□□□□ -1.49
H3F3AP84243 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.72□□□□□ -1.49
H3F3AP84243 AC063977.7-201ENST00000594454 337 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.72□□□□□ -1.49
H3F3AP84243 SNORA74.4-201ENST00000607595 199 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 AL445649.1-201ENST00000615941 691 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 TCL6_3.1-201ENST00000619064 137 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 AC089999.3-201ENST00000622440 577 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.72□□□□□ -1.49
H3F3AP84243 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.72□□□□□ -1.49
H3F3AP84243 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.72□□□□□ -1.49
H3F3AP84243 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.72□□□□□ -1.49
H3F3AP84243 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.72□□□□□ -1.49
H3F3AP84243 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
H3F3AP84243 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
H3F3AP84243 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
H3F3AP84243 AC022034.1-201ENST00000512867 2156 ntBASIC5.72□□□□□ -1.49
H3F3AP84243 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.71□□□□□ -1.49
H3F3AP84243 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
H3F3AP84243 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
H3F3AP84243 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
H3F3AP84243 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.71□□□□□ -1.5
H3F3AP84243 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
H3F3AP84243 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms