Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.3□□□□□ -1.24
HMGCS2P54868 RN7SL214P-201ENST00000487317 265 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HMGCS2P54868 AC106800.3-201ENST00000511389 308 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 AC114781.3-201ENST00000512083 142 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 AC106800.2-201ENST00000514009 1103 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 RNA5SP438-201ENST00000516561 112 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 RNA5SP434-201ENST00000516647 121 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 IGKV1D-22-201ENST00000518953 324 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 AP003396.4-201ENST00000527574 265 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.3□□□□□ -1.24
HMGCS2P54868 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.3□□□□□ -1.24
HMGCS2P54868 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.3□□□□□ -1.24
HMGCS2P54868 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
HMGCS2P54868 AL359704.2-201ENST00000604335 521 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 AL591167.1-201ENST00000607321 456 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 AC245014.3-201ENST00000618589 347 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.3□□□□□ -1.24
HMGCS2P54868 MIR7159-201ENST00000620587 66 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 AC010480.1-201ENST00000624823 684 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.3□□□□□ -1.24
HMGCS2P54868 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HMGCS2P54868 MTCO1P11-201ENST00000429111 1528 ntBASIC7.3□□□□□ -1.24
HMGCS2P54868 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
HMGCS2P54868 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.3□□□□□ -1.24
HMGCS2P54868 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.3□□□□□ -1.24
HMGCS2P54868 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
HMGCS2P54868 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
HMGCS2P54868 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.3□□□□□ -1.24
HMGCS2P54868 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HMGCS2P54868 AC079777.1-201ENST00000623836 1953 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.29□□□□□ -1.24
HMGCS2P54868 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.29□□□□□ -1.24
HMGCS2P54868 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 AC009120.2-204ENST00000621548 2032 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 PSG10P-201ENST00000501199 1500 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 TMSB4XP2-201ENST00000335179 210 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 RNFT1P3-201ENST00000340898 1052 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
HMGCS2P54868 AC087752.1-201ENST00000391360 558 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.29□□□□□ -1.24
HMGCS2P54868 AL096800.1-201ENST00000405326 893 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.29□□□□□ -1.24
HMGCS2P54868 AC091390.2-201ENST00000432573 374 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 OR3D1P-201ENST00000438288 955 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.29□□□□□ -1.24
HMGCS2P54868 ACA64.1-201ENST00000459171 127 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.29□□□□□ -1.24
HMGCS2P54868 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.29□□□□□ -1.24
HMGCS2P54868 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.29□□□□□ -1.24
HMGCS2P54868 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.29□□□□□ -1.24
HMGCS2P54868 RPA2P1-201ENST00000556557 721 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.29□□□□□ -1.24
HMGCS2P54868 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.29□□□□□ -1.24
HMGCS2P54868 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.29□□□□□ -1.24
HMGCS2P54868 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.29□□□□□ -1.24
HMGCS2P54868 AC108673.3-201ENST00000609183 335 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 AC073488.3-201ENST00000631611 778 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.29□□□□□ -1.24
HMGCS2P54868 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
HMGCS2P54868 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.29□□□□□ -1.24
HMGCS2P54868 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.29□□□□□ -1.24
HMGCS2P54868 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
HMGCS2P54868 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
HMGCS2P54868 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HMGCS2P54868 USP13-203ENST00000496897 2747 ntTSL 2 BASIC7.29□□□□□ -1.24
HMGCS2P54868 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HMGCS2P54868 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
HMGCS2P54868 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.28□□□□□ -1.24
HMGCS2P54868 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HMGCS2P54868 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HMGCS2P54868 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HMGCS2P54868 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HMGCS2P54868 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
HMGCS2P54868 OR2M1P-201ENST00000318104 951 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 TMSB4XP4-201ENST00000323496 618 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 RNU1-49P-201ENST00000363468 159 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 AL132875.1-201ENST00000403623 949 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 AC008753.1-201ENST00000423096 284 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 RPL12P12-201ENST00000424633 501 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.28□□□□□ -1.24
HMGCS2P54868 PPIAP10-201ENST00000438675 458 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 CFL1P4-201ENST00000451536 498 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 AC090958.1-201ENST00000511122 351 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 Y_RNA.710-201ENST00000516975 110 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 AP001858.2-201ENST00000536213 601 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms