Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 RNU4ATAC2P-201ENST00000408674 126 ntBASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 AC091390.2-201ENST00000432573 374 ntBASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 RPS12P17-201ENST00000438591 377 ntBASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 AC091965.3-201ENST00000506236 208 ntBASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 OR5D15P-201ENST00000531671 942 ntBASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
COL22A1Q8NFW1 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 AL023806.3-201ENST00000638502 2704 ntBASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 RNA5SP507-201ENST00000363603 121 ntBASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 CASP5-209ENST00000531367 879 ntTSL 5 BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 OR8G3P-201ENST00000533406 921 ntBASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 AL137067.2-201ENST00000621202 131 ntBASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 AC116631.1-202ENST00000640984 683 ntBASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 NEK2P4-201ENST00000425793 1329 ntBASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 AL512310.3-201ENST00000547023 1335 ntBASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
COL22A1Q8NFW1 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 RPA2P2-201ENST00000419698 796 ntBASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 AC245047.1-201ENST00000433276 873 ntBASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 AC106800.2-201ENST00000514009 1103 ntBASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 RPSAP73-201ENST00000614820 330 ntBASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 AC119674.1-204ENST00000641348 1343 ntBASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 AC025809.2-201ENST00000625085 1802 ntBASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
COL22A1Q8NFW1 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 AC009237.3-203ENST00000442128 3551 ntBASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 AC103591.2-201ENST00000265259 766 ntBASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 AL662874.1-201ENST00000426065 230 ntBASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 AL139148.1-201ENST00000427122 680 ntBASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 AC012075.1-201ENST00000436549 580 ntBASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 Z84478.1-201ENST00000438230 1219 ntBASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 AL445222.1-201ENST00000607259 628 ntBASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 AC119674.1-217ENST00000641942 1086 ntBASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 AP003972.1-201ENST00000625192 5446 ntBASIC8.21□□□□□ -1.1
COL22A1Q8NFW1 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms