Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC022880.2-201ENST00000532664 270 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 CACNA1C-AS3-201ENST00000543559 444 ntTSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 HP-207ENST00000562526 685 ntTSL 3 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AP001178.2-201ENST00000580007 326 ntTSL 3 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 RN7SL474P-201ENST00000583485 301 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC003098.1-201ENST00000591540 494 ntTSL 3 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AL139123.1-201ENST00000612008 430 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 AL353726.1-201ENST00000614041 1000 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 CR381653.2-201ENST00000624041 768 ntBASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 NPSR1-202ENST00000360581 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
DEPDC4Q8N2C3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC009166.2-201ENST00000624410 2833 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 PABPC1P9-201ENST00000426076 1612 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 RNU6-501P-201ENST00000364072 100 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 NINJ2-202ENST00000397265 793 ntAPPRIS ALT2 TSL 3 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 CIR1P3-201ENST00000405137 479 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 MORN2-202ENST00000409077 465 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 PIGX-204ENST00000421265 677 ntTSL 2 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AL139158.1-201ENST00000424719 340 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 FTH1P5-201ENST00000425761 545 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AP003385.1-201ENST00000426387 893 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AL035420.1-201ENST00000430679 458 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC244205.2-201ENST00000434790 898 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 UBE2FP3-201ENST00000436366 524 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 ZNF341-AS1-203ENST00000443171 642 ntTSL 2 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 MTATP6P30-201ENST00000443540 664 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 RPL7P36-201ENST00000444633 681 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC093655.1-201ENST00000446187 641 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 RBMY2OP-201ENST00000447105 810 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 RPSAP54-201ENST00000454001 886 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 TUBB4BP2-201ENST00000454125 798 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 RPL12P5-201ENST00000475149 392 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC041039.1-201ENST00000485656 536 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC117392.1-201ENST00000487061 596 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC023424.2-201ENST00000493479 777 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC111193.1-201ENST00000504097 155 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC103409.1-202ENST00000518416 577 ntTSL 4 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC008802.1-201ENST00000519121 791 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC084251.1-201ENST00000521867 382 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AP003354.1-201ENST00000523791 533 ntTSL 2 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 BANF2-205ENST00000545418 360 ntTSL 3 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC089998.4-201ENST00000552532 459 ntTSL 3 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms