Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.55□□□□□ -1.68
CKS1BP61024 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CKS1BP61024 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.55□□□□□ -1.68
CKS1BP61024 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CKS1BP61024 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CKS1BP61024 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.55□□□□□ -1.68
CKS1BP61024 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC4.55□□□□□ -1.68
CKS1BP61024 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CKS1BP61024 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.55□□□□□ -1.68
CKS1BP61024 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC4.55□□□□□ -1.68
CKS1BP61024 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CKS1BP61024 ZNF101P1-201ENST00000435701 1720 ntBASIC4.55□□□□□ -1.68
CKS1BP61024 MTND5P12-201ENST00000502851 1449 ntBASIC4.55□□□□□ -1.68
CKS1BP61024 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CKS1BP61024 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.54□□□□□ -1.68
CKS1BP61024 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC4.54□□□□□ -1.68
CKS1BP61024 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CKS1BP61024 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.54□□□□□ -1.68
CKS1BP61024 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.54□□□□□ -1.68
CKS1BP61024 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CKS1BP61024 RN7SKP74-201ENST00000362849 309 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CKS1BP61024 RNU2-22P-201ENST00000411266 212 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC4.54□□□□□ -1.68
CKS1BP61024 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 EIF4A1P13-201ENST00000415667 230 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC4.54□□□□□ -1.68
CKS1BP61024 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC4.54□□□□□ -1.68
CKS1BP61024 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
CKS1BP61024 SNX19-202ENST00000426933 888 ntTSL 2 BASIC4.54□□□□□ -1.68
CKS1BP61024 AC009299.1-201ENST00000429684 717 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 MYL6P3-201ENST00000436904 432 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC4.54□□□□□ -1.68
CKS1BP61024 SLAMF6P1-201ENST00000451067 602 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 AL139156.3-201ENST00000454802 394 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC4.54□□□□□ -1.68
CKS1BP61024 AP000805.1-201ENST00000471604 784 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 RN7SL561P-201ENST00000488553 281 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 AC138409.2-202ENST00000507274 458 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC4.54□□□□□ -1.68
CKS1BP61024 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC4.54□□□□□ -1.68
CKS1BP61024 NACAP6-201ENST00000509572 622 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
CKS1BP61024 RNA5SP518-201ENST00000515957 119 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 GLYATL1P4-201ENST00000529326 906 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.54□□□□□ -1.68
CKS1BP61024 LYZ-202ENST00000548839 558 ntTSL 2 BASIC4.54□□□□□ -1.68
CKS1BP61024 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CKS1BP61024 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
CKS1BP61024 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC4.54□□□□□ -1.68
CKS1BP61024 UBE2CP4-201ENST00000561405 535 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC4.54□□□□□ -1.68
CKS1BP61024 AC004232.1-201ENST00000571388 208 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC4.54□□□□□ -1.68
CKS1BP61024 AC005495.1-201ENST00000586611 1211 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 AC025857.2-201ENST00000602711 238 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 AC097467.4-201ENST00000605504 141 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC4.54□□□□□ -1.68
CKS1BP61024 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC4.54□□□□□ -1.68
CKS1BP61024 AC016542.3-201ENST00000623520 619 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 AC133485.6-201ENST00000624045 688 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC4.54□□□□□ -1.68
CKS1BP61024 AC011503.2-201ENST00000594230 1500 ntBASIC4.54□□□□□ -1.68
CKS1BP61024 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CKS1BP61024 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
CKS1BP61024 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC4.54□□□□□ -1.68
CKS1BP61024 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.54□□□□□ -1.68
CKS1BP61024 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CKS1BP61024 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.53□□□□□ -1.68
CKS1BP61024 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC4.53□□□□□ -1.68
CKS1BP61024 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CKS1BP61024 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CKS1BP61024 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CKS1BP61024 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC4.53□□□□□ -1.68
CKS1BP61024 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CKS1BP61024 RNA5SP350-201ENST00000363298 111 ntBASIC4.53□□□□□ -1.68
CKS1BP61024 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms