Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.58□□□□□ -1.52
CBX5P45973 AC005277.2-201ENST00000617898 390 ntBASIC5.58□□□□□ -1.52
CBX5P45973 AC133485.6-201ENST00000624045 688 ntBASIC5.58□□□□□ -1.52
CBX5P45973 AL162377.2-201ENST00000624532 337 ntBASIC5.58□□□□□ -1.52
CBX5P45973 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.58□□□□□ -1.52
CBX5P45973 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC5.58□□□□□ -1.52
CBX5P45973 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CBX5P45973 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CBX5P45973 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CBX5P45973 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.58□□□□□ -1.52
CBX5P45973 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
CBX5P45973 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CBX5P45973 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.58□□□□□ -1.52
CBX5P45973 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CBX5P45973 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CBX5P45973 AC110373.1-201ENST00000505994 3505 ntBASIC5.58□□□□□ -1.52
CBX5P45973 SAMMSON-213ENST00000641336 1521 ntBASIC5.58□□□□□ -1.52
CBX5P45973 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CBX5P45973 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.58□□□□□ -1.52
CBX5P45973 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.58□□□□□ -1.52
CBX5P45973 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CBX5P45973 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CBX5P45973 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.57□□□□□ -1.52
CBX5P45973 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.57□□□□□ -1.52
CBX5P45973 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
CBX5P45973 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.57□□□□□ -1.52
CBX5P45973 AC096921.2-201ENST00000561507 1916 ntBASIC5.57□□□□□ -1.52
CBX5P45973 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.57□□□□□ -1.52
CBX5P45973 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CBX5P45973 AC093107.1-201ENST00000422772 609 ntBASIC5.57□□□□□ -1.52
CBX5P45973 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.57□□□□□ -1.52
CBX5P45973 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.57□□□□□ -1.52
CBX5P45973 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC5.57□□□□□ -1.52
CBX5P45973 DBIL5P2-201ENST00000443827 253 ntBASIC5.57□□□□□ -1.52
CBX5P45973 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC5.57□□□□□ -1.52
CBX5P45973 GAPDHP14-201ENST00000450472 937 ntBASIC5.57□□□□□ -1.52
CBX5P45973 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.57□□□□□ -1.52
CBX5P45973 AC008620.1-201ENST00000468453 592 ntBASIC5.57□□□□□ -1.52
CBX5P45973 RPL7AP56-201ENST00000476420 791 ntBASIC5.57□□□□□ -1.52
CBX5P45973 RN7SL849P-201ENST00000485236 295 ntBASIC5.57□□□□□ -1.52
CBX5P45973 OR11I1P-201ENST00000486033 954 ntBASIC5.57□□□□□ -1.52
CBX5P45973 NPM1P27-201ENST00000502784 830 ntBASIC5.57□□□□□ -1.52
CBX5P45973 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.57□□□□□ -1.52
CBX5P45973 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC5.57□□□□□ -1.52
CBX5P45973 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.57□□□□□ -1.52
CBX5P45973 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.57□□□□□ -1.52
CBX5P45973 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC5.57□□□□□ -1.52
CBX5P45973 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.57□□□□□ -1.52
CBX5P45973 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC5.57□□□□□ -1.52
CBX5P45973 AL162632.2-201ENST00000553933 399 ntBASIC5.57□□□□□ -1.52
CBX5P45973 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.57□□□□□ -1.52
CBX5P45973 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.57□□□□□ -1.52
CBX5P45973 AC091304.4-201ENST00000565703 620 ntBASIC5.57□□□□□ -1.52
CBX5P45973 RN7SL25P-201ENST00000583862 260 ntBASIC5.57□□□□□ -1.52
CBX5P45973 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.57□□□□□ -1.52
CBX5P45973 WBP1LP11-201ENST00000586141 328 ntBASIC5.57□□□□□ -1.52
CBX5P45973 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
CBX5P45973 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 AL035417.2-201ENST00000603887 796 ntBASIC5.57□□□□□ -1.52
CBX5P45973 AC005070.2-201ENST00000604391 260 ntBASIC5.57□□□□□ -1.52
CBX5P45973 AC114546.4-201ENST00000624413 369 ntBASIC5.57□□□□□ -1.52
CBX5P45973 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CBX5P45973 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CBX5P45973 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CBX5P45973 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
CBX5P45973 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CBX5P45973 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.57□□□□□ -1.52
CBX5P45973 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CBX5P45973 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CBX5P45973 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.56□□□□□ -1.52
CBX5P45973 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.56□□□□□ -1.52
CBX5P45973 AL512353.3-201ENST00000417517 1326 ntBASIC5.56□□□□□ -1.52
CBX5P45973 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CBX5P45973 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CBX5P45973 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CBX5P45973 RNA5SP114-201ENST00000363780 113 ntBASIC5.56□□□□□ -1.52
CBX5P45973 RNU12-2P-201ENST00000364789 156 ntBASIC5.56□□□□□ -1.52
CBX5P45973 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CBX5P45973 RNA5SP280-201ENST00000411230 115 ntBASIC5.56□□□□□ -1.52
CBX5P45973 PPIL1P1-201ENST00000423936 499 ntBASIC5.56□□□□□ -1.52
CBX5P45973 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.56□□□□□ -1.52
CBX5P45973 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.56□□□□□ -1.52
CBX5P45973 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.56□□□□□ -1.52
CBX5P45973 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.56□□□□□ -1.52
CBX5P45973 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms