Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.64□□□□□ -1.35
HTTP42858 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HTTP42858 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.63□□□□□ -1.35
HTTP42858 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HTTP42858 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC6.63□□□□□ -1.35
HTTP42858 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.63□□□□□ -1.35
HTTP42858 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.63□□□□□ -1.35
HTTP42858 AC006463.2-201ENST00000473326 348 ntBASIC6.63□□□□□ -1.35
HTTP42858 AC079075.1-201ENST00000559543 878 ntBASIC6.63□□□□□ -1.35
HTTP42858 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC6.63□□□□□ -1.35
HTTP42858 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 ACTR3C-206ENST00000613959 5142 ntBASIC6.63□□□□□ -1.35
HTTP42858 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
HTTP42858 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 AP000997.2-201ENST00000564619 8400 ntBASIC6.63□□□□□ -1.35
HTTP42858 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
HTTP42858 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
HTTP42858 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
HTTP42858 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.63□□□□□ -1.35
HTTP42858 DLG1-201ENST00000346964 5034 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.63□□□□□ -1.35
HTTP42858 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
HTTP42858 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.63□□□□□ -1.35
HTTP42858 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.63□□□□□ -1.35
HTTP42858 HMGA1P8-201ENST00000414130 321 ntBASIC6.63□□□□□ -1.35
HTTP42858 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.63□□□□□ -1.35
HTTP42858 OR52B5P-201ENST00000435337 951 ntBASIC6.63□□□□□ -1.35
HTTP42858 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.63□□□□□ -1.35
HTTP42858 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.63□□□□□ -1.35
HTTP42858 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.63□□□□□ -1.35
HTTP42858 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.63□□□□□ -1.35
HTTP42858 OR6M2P-201ENST00000529831 871 ntBASIC6.63□□□□□ -1.35
HTTP42858 OR52B5P-202ENST00000641118 1110 ntBASIC6.63□□□□□ -1.35
HTTP42858 AP002370.1-201ENST00000528055 1602 ntBASIC6.63□□□□□ -1.35
HTTP42858 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 AC119674.1-204ENST00000641348 1343 ntBASIC6.63□□□□□ -1.35
HTTP42858 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.63□□□□□ -1.35
HTTP42858 RPS23P9-201ENST00000448848 438 ntBASIC6.63□□□□□ -1.35
HTTP42858 TPT1P12-201ENST00000448968 492 ntBASIC6.63□□□□□ -1.35
HTTP42858 RN7SL30P-201ENST00000488416 306 ntBASIC6.63□□□□□ -1.35
HTTP42858 AC008629.2-201ENST00000503783 483 ntBASIC6.63□□□□□ -1.35
HTTP42858 AC109481.1-201ENST00000509173 282 ntBASIC6.63□□□□□ -1.35
HTTP42858 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.63□□□□□ -1.35
HTTP42858 RNF138P2-201ENST00000603490 592 ntBASIC6.63□□□□□ -1.35
HTTP42858 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HTTP42858 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC6.62□□□□□ -1.35
HTTP42858 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.62□□□□□ -1.35
HTTP42858 MADD-202ENST00000342922 6005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
HTTP42858 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 RN7SKP23-201ENST00000625159 4301 ntBASIC6.62□□□□□ -1.35
HTTP42858 AC022905.1-201ENST00000503430 3048 ntBASIC6.62□□□□□ -1.35
HTTP42858 RPL7P56-201ENST00000429441 717 ntBASIC6.62□□□□□ -1.35
HTTP42858 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.62□□□□□ -1.35
HTTP42858 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.62□□□□□ -1.35
HTTP42858 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.62□□□□□ -1.35
HTTP42858 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.62□□□□□ -1.35
HTTP42858 IGBP1P1-201ENST00000554337 1009 ntBASIC6.62□□□□□ -1.35
HTTP42858 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.62□□□□□ -1.35
HTTP42858 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 CLCA3P-203ENST00000490028 2781 ntBASIC6.62□□□□□ -1.35
HTTP42858 USP48-203ENST00000374732 3037 ntTSL 2 BASIC6.62□□□□□ -1.35
HTTP42858 FO082842.1-201ENST00000423552 1370 ntBASIC6.62□□□□□ -1.35
HTTP42858 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
HTTP42858 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.62□□□□□ -1.35
HTTP42858 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
HTTP42858 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 NENFP1-201ENST00000419476 466 ntBASIC6.62□□□□□ -1.35
HTTP42858 AC019185.1-201ENST00000442718 389 ntBASIC6.62□□□□□ -1.35
HTTP42858 RPS3AP41-201ENST00000462701 778 ntBASIC6.62□□□□□ -1.35
HTTP42858 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.62□□□□□ -1.35
HTTP42858 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HTTP42858 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.62□□□□□ -1.35
HTTP42858 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.62□□□□□ -1.35
HTTP42858 AC209154.1-201ENST00000582156 337 ntBASIC6.62□□□□□ -1.35
HTTP42858 AC087385.3-201ENST00000620477 187 ntBASIC6.62□□□□□ -1.35
HTTP42858 LINC01739-205ENST00000641890 573 ntBASIC6.62□□□□□ -1.35
HTTP42858 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HTTP42858 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms