Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 FO393409.1-201ENST00000399325 1372 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCL3L1P16619 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCL3L1P16619 LINC01613-201ENST00000561476 2780 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CCL3L1P16619 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCL3L1P16619 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCL3L1P16619 AL157702.1-201ENST00000398764 426 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCL3L1P16619 PSMA6P1-201ENST00000400275 741 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 VN1R20P-201ENST00000425215 966 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 AC010086.1-201ENST00000437359 1052 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.21□□□□□ -1.58
CCL3L1P16619 AC009237.1-201ENST00000442127 744 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 VPS25P1-201ENST00000455691 508 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 RN7SL643P-201ENST00000471845 291 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.21□□□□□ -1.58
CCL3L1P16619 RN7SL836P-201ENST00000476140 296 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 AC098818.1-201ENST00000478593 252 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 HMGN1P16-201ENST00000508308 283 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.21□□□□□ -1.58
CCL3L1P16619 IGHV4-55-201ENST00000520889 368 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.21□□□□□ -1.58
CCL3L1P16619 AP005639.1-201ENST00000526939 192 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 AP003033.2-201ENST00000528901 805 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CCL3L1P16619 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.21□□□□□ -1.58
CCL3L1P16619 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.21□□□□□ -1.58
CCL3L1P16619 MT1CP-201ENST00000567054 174 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.21□□□□□ -1.58
CCL3L1P16619 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.21□□□□□ -1.58
CCL3L1P16619 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.21□□□□□ -1.58
CCL3L1P16619 AC011500.1-201ENST00000601963 469 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 uc_338.29-201ENST00000615099 168 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.21□□□□□ -1.58
CCL3L1P16619 TCL6_3.1-201ENST00000619064 137 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 MIR6811-201ENST00000620409 58 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 MIR7159-201ENST00000620587 66 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.21□□□□□ -1.58
CCL3L1P16619 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.21□□□□□ -1.58
CCL3L1P16619 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.21□□□□□ -1.58
CCL3L1P16619 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.21□□□□□ -1.58
CCL3L1P16619 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CCL3L1P16619 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.21□□□□□ -1.58
CCL3L1P16619 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCL3L1P16619 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCL3L1P16619 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCL3L1P16619 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCL3L1P16619 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CCL3L1P16619 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.2□□□□□ -1.58
CCL3L1P16619 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CCL3L1P16619 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 MAPK10-287ENST00000641217 3037 ntBASIC5.2□□□□□ -1.58
CCL3L1P16619 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 AC011815.2-201ENST00000618230 2021 ntBASIC5.2□□□□□ -1.58
CCL3L1P16619 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCL3L1P16619 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 AC112492.2-201ENST00000432774 1030 ntBASIC5.2□□□□□ -1.58
CCL3L1P16619 AC013403.1-201ENST00000436954 263 ntBASIC5.2□□□□□ -1.58
CCL3L1P16619 AL355355.1-201ENST00000442900 793 ntBASIC5.2□□□□□ -1.58
CCL3L1P16619 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.2□□□□□ -1.58
CCL3L1P16619 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.2□□□□□ -1.58
CCL3L1P16619 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.2□□□□□ -1.58
CCL3L1P16619 YRDCP3-201ENST00000456507 480 ntBASIC5.2□□□□□ -1.58
CCL3L1P16619 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.2□□□□□ -1.58
CCL3L1P16619 AC005017.1-201ENST00000482002 490 ntBASIC5.2□□□□□ -1.58
CCL3L1P16619 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.2□□□□□ -1.58
CCL3L1P16619 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.2□□□□□ -1.58
CCL3L1P16619 AC005632.2-201ENST00000564271 828 ntBASIC5.2□□□□□ -1.58
CCL3L1P16619 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.2□□□□□ -1.58
CCL3L1P16619 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.2□□□□□ -1.58
CCL3L1P16619 RPSAP75-201ENST00000605848 301 ntBASIC5.2□□□□□ -1.58
CCL3L1P16619 AC005828.7-201ENST00000607331 556 ntBASIC5.2□□□□□ -1.58
CCL3L1P16619 AL445649.1-201ENST00000615941 691 ntBASIC5.2□□□□□ -1.58
CCL3L1P16619 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.2□□□□□ -1.58
CCL3L1P16619 AC010325.3-201ENST00000641084 394 ntBASIC5.2□□□□□ -1.58
CCL3L1P16619 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
CCL3L1P16619 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCL3L1P16619 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.2□□□□□ -1.58
CCL3L1P16619 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCL3L1P16619 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCL3L1P16619 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCL3L1P16619 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCL3L1P16619 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCL3L1P16619 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms