Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL1A1P02452 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
COL1A1P02452 BIN2P1-201ENST00000504996 1530 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
COL1A1P02452 OR11H13P-201ENST00000359695 979 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 RN7SKP144-201ENST00000411108 279 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.58□□□□□ -1.2
COL1A1P02452 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.58□□□□□ -1.2
COL1A1P02452 RPL31P15-201ENST00000449770 338 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.58□□□□□ -1.2
COL1A1P02452 CST12P-201ENST00000457644 362 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 AC098847.1-201ENST00000473094 348 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.58□□□□□ -1.2
COL1A1P02452 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.58□□□□□ -1.2
COL1A1P02452 SCARNA18.1-201ENST00000516330 83 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 RNA5SP271-201ENST00000516700 88 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.58□□□□□ -1.2
COL1A1P02452 AC022826.1-201ENST00000519383 805 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.58□□□□□ -1.2
COL1A1P02452 AP003396.4-201ENST00000527574 265 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.58□□□□□ -1.2
COL1A1P02452 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.58□□□□□ -1.2
COL1A1P02452 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.58□□□□□ -1.2
COL1A1P02452 MIR3189-201ENST00000578735 73 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.58□□□□□ -1.2
COL1A1P02452 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.58□□□□□ -1.2
COL1A1P02452 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.58□□□□□ -1.2
COL1A1P02452 AC008555.7-201ENST00000605008 583 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 AL513218.1-201ENST00000606527 391 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 AC012254.5-201ENST00000623573 478 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
COL1A1P02452 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.58□□□□□ -1.2
COL1A1P02452 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
COL1A1P02452 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
COL1A1P02452 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.58□□□□□ -1.2
COL1A1P02452 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL1A1P02452 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL1A1P02452 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
COL1A1P02452 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL1A1P02452 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
COL1A1P02452 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL1A1P02452 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
COL1A1P02452 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL1A1P02452 CYP2G2P-201ENST00000594920 1485 ntBASIC7.58□□□□□ -1.2
COL1A1P02452 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.58□□□□□ -1.2
COL1A1P02452 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.58□□□□□ -1.2
COL1A1P02452 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.57□□□□□ -1.2
COL1A1P02452 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.57□□□□□ -1.2
COL1A1P02452 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL1A1P02452 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL1A1P02452 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
COL1A1P02452 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL1A1P02452 GUCY1B2-204ENST00000531898 1979 ntBASIC7.57□□□□□ -1.2
COL1A1P02452 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL1A1P02452 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL1A1P02452 RNA5SP273-201ENST00000362484 113 ntBASIC7.57□□□□□ -1.2
COL1A1P02452 AL445238.1-204ENST00000400311 463 ntBASIC7.57□□□□□ -1.2
COL1A1P02452 RNA5SP178-201ENST00000410380 128 ntBASIC7.57□□□□□ -1.2
COL1A1P02452 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.57□□□□□ -1.2
COL1A1P02452 AL354890.1-201ENST00000413730 346 ntBASIC7.57□□□□□ -1.2
COL1A1P02452 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.57□□□□□ -1.2
COL1A1P02452 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.57□□□□□ -1.2
COL1A1P02452 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL1A1P02452 AC092967.1-201ENST00000449016 481 ntBASIC7.57□□□□□ -1.2
COL1A1P02452 RN7SL177P-201ENST00000476596 299 ntBASIC7.57□□□□□ -1.2
COL1A1P02452 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.57□□□□□ -1.2
COL1A1P02452 AC106800.3-201ENST00000511389 308 ntBASIC7.57□□□□□ -1.2
COL1A1P02452 SNORD46.2-201ENST00000516021 102 ntBASIC7.57□□□□□ -1.2
COL1A1P02452 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.57□□□□□ -1.2
COL1A1P02452 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.57□□□□□ -1.2
COL1A1P02452 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.57□□□□□ -1.2
COL1A1P02452 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.57□□□□□ -1.2
COL1A1P02452 MIR4443-201ENST00000585052 53 ntBASIC7.57□□□□□ -1.2
COL1A1P02452 AC018659.2-201ENST00000624690 715 ntBASIC7.57□□□□□ -1.2
COL1A1P02452 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.57□□□□□ -1.2
COL1A1P02452 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7.57□□□□□ -1.2
COL1A1P02452 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL1A1P02452 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL1A1P02452 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
COL1A1P02452 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.57□□□□□ -1.2
COL1A1P02452 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL1A1P02452 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL1A1P02452 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.57□□□□□ -1.2
COL1A1P02452 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
COL1A1P02452 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.57□□□□□ -1.2
COL1A1P02452 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.57□□□□□ -1.2
COL1A1P02452 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.57□□□□□ -1.2
COL1A1P02452 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
COL1A1P02452 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.57□□□□□ -1.2
COL1A1P02452 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
COL1A1P02452 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL1A1P02452 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
COL1A1P02452 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL1A1P02452 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.56□□□□□ -1.2
COL1A1P02452 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL1A1P02452 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
COL1A1P02452 AC091305.2-201ENST00000624049 1576 ntBASIC7.56□□□□□ -1.2
COL1A1P02452 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC7.56□□□□□ -1.2
COL1A1P02452 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
COL1A1P02452 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms